Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g121 ATGAAACTATTATATTTTGAAGGTGAACTTGCTGAAGTCAATGTCGGTAAAGATAGTAAGAATTTTTATGATGTCTTGGTTCCTGCTGATCATGTGAGCATGAGTTGCCATTGCAAGTGGGCATCAGACAGAGCTGTTTTAGGATGGGGCATACTCATGACTGGAGATGTTTACTGGAGAGATTACGTTGATTCGACTCATTATCCTGTATTTTATCAGTGGGAAGGAGTTTGTCTTTTTTCCAGGGGGGAGGTGTCTGGTACAGATGCCACATGTTATGCAGCTGATGATTGTGTTGTAGGTTATGCCACTATTTGCAAAATTTAG 327 40.37 MKLLYFEGELAEVNVGKDSKNFYDVLVPADHVSMSCHCKWASDRAVLGWGILMTGDVYWRDYVDSTHYPVFYQWEGVCLFSRGEVSGTDATCYAADDCVVGYATICKI* 109
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1198055 1206373 + Vvi1g121 Vvi1g121 769321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g121 108 PANTHER PHENYLALANYL-TRNA SYNTHETASE 15 85 - -
Vvi1g121 108 PANTHER PHENYLALANINE--TRNA LIGASE, MITOCHONDRIAL 15 85 IPR004530 GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432
Vvi1g121 108 Gene3D Bira Bifunctional Protein; Domain 2 37 98 IPR045864 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g121 K01889 - ming:122064840 84.3445