Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1235 ATGTCCAGCTTAATTCATAAGGGCATTCTCAAAACTGAAGCCCTCACAAAGTATATATTGGAAACAAGTGCATATCCAAGAGAGCATGAGCAGCTGAGAGGACTCAGGGAGGCCACTGTAGAAAAGCAAGAGTTTTGGAGCATCATGAATGTGCCTGTTGACGAAGGACTGTTCATTTCAATGCTTTTAAAGCTCATGAATGTCAAGAAGACAATTGAACTCGGAGTTTTCACCGGTTATTCTCTCTTGGCAACCCCTCTTGCCCTGCCTCAAGATGGCAAGGCAAGGCTCTCTAGAAAAGAAAATAAAGCGTACCAAATTGGAGTGCCATTTATCAAGAAGCCAGGTGTGGAGCATAAGATCAACTTCATCCAATCGGATGCAATGTCAGTTCTAAATGATCTCATTGCCGATGGGAACGAAGAAGGGACATTGGATTTTGCGTTTGTGGATGCTGATAAGGAGAACTACCTCAACTACCATGAGCTGCTGCTGAAGTTGGTTAGAGTTGGAGGCATAATCGCTTACGATAACACTCTATGGTTTGGTTCAGTAGCGCGATCTGAAGAAGAAGAAATGATGGATTTTGAGAGAGCAGGCAGAGTCCATCTCATGAAGTTGAACAAATTCTTGGCATCAGATCCCAGGGTTGAACTCTCTCACCTTTCCATTGGAGATGGCATCGCGCTCTGCAGGCGCCTCTATTAG 708 44.49 MSSLIHKGILKTEALTKYILETSAYPREHEQLRGLREATVEKQEFWSIMNVPVDEGLFISMLLKLMNVKKTIELGVFTGYSLLATPLALPQDGKARLSRKENKAYQIGVPFIKKPGVEHKINFIQSDAMSVLNDLIADGNEEGTLDFAFVDADKENYLNYHELLLKLVRVGGIIAYDNTLWFGSVARSEEEEMMDFERAGRVHLMKLNKFLASDPRVELSHLSIGDGIALCRRLY* 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 20818547 20820093 + Vvi1g1235 Vvi1g1235 770435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1235 235 ProSitePatterns EF-hand calcium-binding domain. 151 163 IPR018247 -
Vvi1g1235 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 233 IPR029063 -
Vvi1g1235 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 8 234 IPR002935 GO:0008171
Vvi1g1235 235 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 5 235 - -
Vvi1g1235 235 Pfam O-methyltransferase 21 234 IPR002935 GO:0008171
Vvi1g1235 235 Gene3D Vaccinia Virus protein VP39 1 235 IPR029063 -
Vvi1g1235 235 PANTHER O-METHYLTRANSFERASE-RELATED 5 235 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1235 K00588 K13272 vvi:100250579 446.047