Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1259 ATGGGAACTCACCTCCAAGCTTCTGCTCAAGATAATGAGCACATTTTCAGGAGCCAGCATCAAGCAGTTCCAGTGCCAGATAACATGACACTGCCGGACTTTGTGCTTCAGGATGCTGAATTGTATGCTGAAAAGGTGGCATTTGTGGAGGCTGTGACAGGGAAGGAGTATACTTATGGTGAAGTTGTCAGAGATGTAAGGAGGTTTGCTAAGGCCTTGAGGTCAATTGGGCTGAGGAAGGGGAGAGTGGTGGTTGTTGTACTGCCAAATGTGGCTGAGTACGCCATCGTCGCGCTGGGAATAATGGCCGCTGGCGGCGTGTTTTCAGGCGCAAACCCAGCTGGGCATGCTTCAGAGATTAAGAAGCAGGTGGAGGCTGCTGATGCCAAGCTTGTTGTCACAAATGGGGCCATGTATGAGAAGGTGAAAAGCCTGGAGCTACCAGTAATTGTGATGGGGGAAGAACATGTTGCAGGCGCCATAAACTGGGGTGAGCTGCTTGAAGCAGCAGACCGGGCAAACACCGATACAATCAGCGAGGATGTGCACCAGAATGATCTATGTGCCCTCCCATTCTCATCAGGGACTACAGGAATTTCAAAGGGAGTAATGCTCACTCACCGGAATCTGGTAGCTAACCTCTGCTCCACCCTCTTCAGTGTTGGGCCAGAGATGGTGGGACAAATCACTATTCTAGGCCTAATGCCATTCTTTCACATATATGGAATCACTGGAATATGCTGTGCCACACTTAGGAACAAGGGGAAGGTAGTGGTGATTGGGAGGTATGAGCTTAGAACTTTTCTGAATGCATTGATCACACATGAGATCACATTTGCCCCAATTGTGCCGCCAATCATTTTGGCATTGGTTAAGAATCCGATCGTGGAGGAGTTTGATCTCAGCAGGCTCAAGCTTAGGGCAGTCATGACTGCTGCAGCTCCCCTGGCACCTGAGCTCCTCTCTGCCTTTGAGAAGAAGTTCCCTAGTGTCCAAGTCCAAGAGGCATATGGACTGACTGAGCACAGCTGCATTACACTTACTCATGGAGACCCCACTAAAGGCCATGCCACTGCTAAGAAAAACTCAGTTGGGTTCATCCTTCCCAACATGGAGCTCAAGTTCATCGATCCTGAAACCGGTATCTCCCTCCCCAAGAACACCCCTGGTGAAATCTGTGTTAGAAGCCAATGTGTAATGCAAGGCTACTATAAGAACGAGGAGGAGACAGCTCGAACAATTGACAACAATGGATGGCTCCATACTGGCGACATTGGCTACATAGACGATGATGGGGACGTCTTTGTGGTTGATCGCATCAAAGAGTTGATCAAGTACAAAGGCTTCCAAGTAGCTCCTGCTGAGCTAGAGGCCATCCTTCTAAGTCACCCTTCAGTTGAAGACACTGCTGTTGTATCACTGCCTGATGAAGAGGCAGGGGAGATTCCAGCAGCATGTGTAGTGCTCAACCCAGAAGCAAAAGAGACAGAGGAAGAAATTGTGAAGTATGTTGCCTCTAATGTGGCACAGTATAAGAGAGTGAGGGTGGTGCACTTTGTGGAGACTATCCCAAAATCACCATCTGGGAAAATTATGAGAAGGCTTCTTAGAGAAAAGATGCTAGAAAAAATGAAGAACAACACCAAATCTGGTGCTATATTACCCTAA 1668 48.26 MGTHLQASAQDNEHIFRSQHQAVPVPDNMTLPDFVLQDAELYAEKVAFVEAVTGKEYTYGEVVRDVRRFAKALRSIGLRKGRVVVVVLPNVAEYAIVALGIMAAGGVFSGANPAGHASEIKKQVEAADAKLVVTNGAMYEKVKSLELPVIVMGEEHVAGAINWGELLEAADRANTDTISEDVHQNDLCALPFSSGTTGISKGVMLTHRNLVANLCSTLFSVGPEMVGQITILGLMPFFHIYGITGICCATLRNKGKVVVIGRYELRTFLNALITHEITFAPIVPPIILALVKNPIVEEFDLSRLKLRAVMTAAAPLAPELLSAFEKKFPSVQVQEAYGLTEHSCITLTHGDPTKGHATAKKNSVGFILPNMELKFIDPETGISLPKNTPGEICVRSQCVMQGYYKNEEETARTIDNNGWLHTGDIGYIDDDGDVFVVDRIKELIKYKGFQVAPAELEAILLSHPSVEDTAVVSLPDEEAGEIPAACVVLNPEAKETEEEIVKYVASNVAQYKRVRVVHFVETIPKSPSGKIMRRLLREKMLEKMKNNTKSGAILP* 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 21076451 21078724 - Vvi1g1259 Vvi1g1259 770459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1259 555 Pfam AMP-binding enzyme 38 446 IPR000873 -
Vvi1g1259 555 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 543 - -
Vvi1g1259 555 Gene3D - 13 441 IPR042099 -
Vvi1g1259 555 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
Vvi1g1259 555 Gene3D - 442 545 IPR045851 -
Vvi1g1259 555 CDD 4CL 25 536 - -
Vvi1g1259 555 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Vvi1g1259 555 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 7 543 - -
Vvi1g1259 555 SUPERFAMILY Acetyl-CoA synthetase-like 10 544 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1259 K01904 - vvi:100264367 1054.66