Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g129 ATGTTGGGTTTAGCCACCACTGCTACCGCTACCACCGCCACCGCAGCTCCGACCACCGCTGCGAAGAATCGCGTTCTCTGCAGCTCAGGAAGACTTCAGCGGTGGTTTCAGCGTTCTTCGGTCGCGTGCTATCGCATTTCTTCTCCATCGCTGCGGTCTAATTTCTGCGCAGTCAAGGCTATGGCGGAGGCGGACACCATTTCGATTCTGAAGGCTCAGTCTCAGTCCAATGCTTCGGGCAACAAGCAAGCTTTGATTTCGTTGTCCGACAAAAAGGATCTAGCTTTCCTTGGAAATGGCCTCCAAAGTTTAGGATATACAATTGTTTCAACTGGAGGAACAGCATCAGCTTTGGAAAATGCAGGGGTCTCTGTAACTAAAGTGGAACAGCTTACCTGTTTTCCAGAAATGCTTGATGGCCGTGTGAAAACTTTACATCCAAACATACATGGGGGTATTCTTGCTAGAAGAGACCAAAAGCTTCACATGGAAGCTCTTAATGAGCATGGAATTGGTACTTTTGACGTGGTGGTGGTGAACTTGTATCCATTTTATGATAAAGTTTCTTCTGGAGGAATTGAATTTGAAGATGGAATTGAGAACATTGATATTGGTGGCCCAGCCATGATCAGAGCGGCTGCAAAGAATCACAAGGATGTTTTGGTTGTTGTTGATTCACAAGATTATTCCGCACTCCTAGAATTTCTCCAAGGGAACCAGGATGACCAACTGTTCCGAAGAAAGCTTGCTTGGAAGGCTTTCCAACATGTTGCTTCTTATGATTCTGCAGTTTCAGAGTGGCTGTGGAAGCAGACTGTAGGAGACAAATTTCCTCCCAGTCTGACAGTTCCTCTCTCACTCAAAAGTTCTCTTCGTTATGGTGAAAACCCTCATCAAAAGGCTGCATTTTATGTTGACAAGAGTCTTTCTGAGGTTAATGCTGGTGGTATTGCTACTGCCATTCAACACCATGGAAAGGAGATGTCATATAATAACTATTTAGACGCTGATGCAGCTTGGAACTGTGTGTCAGAATTTAAGAACCCTACATGTGTGATAGTAAAGCATACAAATCCCTGTGGAGTAGCTTCACGTGATGACATCCTTGAAGCTTATAGATTAGCTGTGAAAGCAGATCCAGTGAGTGCATTTGGTGGTATCGTAGCCTTCAACATAGAAGTTGATGAGGCACTTGCAAAAGAAATCCGTGAGTTTAGGAGTCCAACTGATGGTGAAACACGGATGTTTTATGAGATTGTGGTTGCACCCAAGTATTCACAAAAGGGACTTGACATCCTCCGTGGAAAATCAAAAACTTTAAGAATTTTGGAAGCAGGCAAGAACGAGAAAGGAAAGCTTTCACTTCGACAAGTTGGTGGGGGTTGGTTAGCGCAGGATTCAGATGATTTAACCCCAGAAGATATCCCATTCAAATTAGTTTCTGAGAAGGCTCCTCCGGAAAGTGAGCTTCGCGATGCTGAGTTTGCATGGTTGTGTGTCAAGCATGTCAAGAGCAATGCCATTGTAATAGCAAAGAATAACTGCATGTTGGGTATGGGGAGTGGGCAGCCAAACCGCCGGGAGAGTTTGAGAATTGCAGTGAGGAAAGCTGGGGATGAGGTCAAAGGAGCTGCTTTGGCCAGTGATGCTTTCTTCCCATTTGCTTGGAAAGATGCGGTGGAAGAAGCATGCGAGAGTGGGATTGGTATCATTGCAGAGCCCGGAGGGAGCATCAGAGATGGAGATGCCATAGACTGCTGTAACAAATACGGGGTATCACTTCTTTTCACCAATGTGAGGCACTTCAGGCATTAA 1815 45.34 MLGLATTATATTATAAPTTAAKNRVLCSSGRLQRWFQRSSVACYRISSPSLRSNFCAVKAMAEADTISILKAQSQSNASGNKQALISLSDKKDLAFLGNGLQSLGYTIVSTGGTASALENAGVSVTKVEQLTCFPEMLDGRVKTLHPNIHGGILARRDQKLHMEALNEHGIGTFDVVVVNLYPFYDKVSSGGIEFEDGIENIDIGGPAMIRAAAKNHKDVLVVVDSQDYSALLEFLQGNQDDQLFRRKLAWKAFQHVASYDSAVSEWLWKQTVGDKFPPSLTVPLSLKSSLRYGENPHQKAAFYVDKSLSEVNAGGIATAIQHHGKEMSYNNYLDADAAWNCVSEFKNPTCVIVKHTNPCGVASRDDILEAYRLAVKADPVSAFGGIVAFNIEVDEALAKEIREFRSPTDGETRMFYEIVVAPKYSQKGLDILRGKSKTLRILEAGKNEKGKLSLRQVGGGWLAQDSDDLTPEDIPFKLVSEKAPPESELRDAEFAWLCVKHVKSNAIVIAKNNCMLGMGSGQPNRRESLRIAVRKAGDEVKGAALASDAFFPFAWKDAVEEACESGIGIIAEPGGSIRDGDAIDCCNKYGVSLLFTNVRHFRH* 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1248326 1254994 - Vvi1g129 Vvi1g129 769329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g129 604 PANTHER BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN PURH 57 604 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g129 604 SUPERFAMILY Methylglyoxal synthase-like 82 271 IPR036914 -
Vvi1g129 604 Gene3D - 285 451 IPR024051 -
Vvi1g129 604 Hamap Bifunctional purine biosynthesis protein PurH [purH]. 81 604 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g129 604 Gene3D - 73 275 IPR036914 -
Vvi1g129 604 ProSiteProfiles MGS-like domain profile. 73 224 IPR011607 -
Vvi1g129 604 Pfam MGS-like domain 98 207 IPR011607 -
Vvi1g129 604 PANTHER AICARFT/IMPCHASE BIENZYME FAMILY PROTEIN 57 604 - -
Vvi1g129 604 SMART aicarft_impchas 213 537 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g129 604 TIGRFAM purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 82 604 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g129 604 Pfam AICARFT/IMPCHase bienzyme 213 536 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g129 604 Gene3D - 471 604 IPR024051 -
Vvi1g129 604 CDD IMPCH 82 268 - -
Vvi1g129 604 PIRSF PurH 75 604 IPR002695 GO:0003937|GO:0004643|GO:0006164
Vvi1g129 604 SMART MGS_2a 93 208 IPR011607 -
Vvi1g129 604 SUPERFAMILY Cytidine deaminase-like 288 604 IPR016193 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g129 K00602 - vvi:100245755 1190.25