Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g134 ATGGCTTCCGGAATCGAGTTTGAGGAAGACAGTGAAAACAAAGGTAGTATGTGGGTTTTGGATCAGAAGCTTGATCAGCCCATGGATGAGGAGGCTGGCAGGCTTAGAAATATGTACAGAGAAAAGAAATTCTCGGCAGTATTGCTTCTTCGGCTTGCATTTCAGAGTCTTGGAGTGGTCTATGGAGACTTGGGCACATCTCCCTTATATGTTTTCTATAATACATTTCCTCGTGGAATCGAAGATCCTGAGGATGTGGTTGGGGCTCTTTCGTTGATCATATACTCCCTTACACTTATTCCGCTGCTCAAGTATATTTTTGTTGTGTGTAGAGCAAATGATAATGGCCAAGGTGGAACATTTGCTCTTTATTCATTACTTTGTCGACATGCAAAAATAAATACTATTCCTAATCAACATCGAACTGATGAAGAGCTTACAACATATAGTCGTACTACATTCCATGAACATTCTTATGCTGCAAAAACAAAAAGATGGTTGGAGGGGCATGCATCTAGGAAGAACATGCTCCTTATTCTTGTCCTTGTTGGTACATGCATGTTGATTGGAGATGGTATTCTCACTCCTGCTATATCAGTTCTTTCTGCTGCTGGTGGGATCAAGGTGGATCACCCTGGGATGAGTAATGAGATAGTTGTTCTTGTCGCTGTTGTAATCTTAGTAGGTTTGTTTAGCATGCAACATTATGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTTCTGCTTTGGTTTCTTGTGATTGGAGGTATTGGTATATTCAACATCTGGAAGTATGATAGCAGTGTTCTGAAAGCATTTTCACCTGTGTACATATATCGGTATTTTAAAAGGGGAGGGAGAGATGGTTGGACCTCTCTTGGAGGGATCATGCTTAGTATCACTGGGACGGAGGCACTTTTTGCCGACCTAGCCCATTTTCCAGTTTCAGCTGTACAGCTTGCGTTCACAGTAGTTGTATTTCCTTGCCTTCTTTTAGCCTATTCTGGACAAGCTGCATACCTCGTGAAAAACCAGGATCATGTGGTTGACGCATTCTATCGTTCTATTCCAGACAGCATATACTGGCCAGTGTTTGTTGTTGCAACTGCAGCTGCTATTGTTGCGAGTCAGGCGACCATATCTGCAACTTTTTCGATAATCAAACAGGCCCTTGCTCTTGGCTGTTTTCCAAGAGTCAAAGTTGTACATACATCAAAGAAGTTTCTTGGCCAGATATATATTCCAGATATTAATTGGGTCCTTATGGTTCTTTGCATTGCTGTGACTGCTGGGTTCAAAAATCAAAGCCAAATTGGCAATGCGTATGGGACAGCTGTCGTGATAGTCATGCTGGCAACCACATTTCTGATGATATTAATTATGTTATTAGTGTGGCGCTGCCACTGGCTTCTTGTCTTAATCTTCACTGGCTTATCACTGGCGGTGGAGTGCACTTACTTCTCTGCCGTACTTTTCAAGGTCGATCAAGGCGGTTGGGTCCCTCTTGTGATTGCAGCTGCTTTTCTCATTATCATGTACGTCTGGCATTATGGTACAGTGAAGCGCTATGAGTTTGAGATGCACAGTAAGGTTTCAATGGCGTGGATTCTTGGGCTTGGCCCTAGTTTAGGGCTTGTCCGTGTCCCTGGTATTGGACTTGTGTACACTGAGCTAGCGAGTGGGGTGCCCCACATTTTCTCCCACTTCATCACAAACCTACCAGCCATCCATTCTGTCGTTGTTTTTGTCTGTGTCAAGTACCTTCCTGTCTACACTGTTCCAGAAGAAGAGAGGTTCCTTGTCAAGCGGATTGGACCCAAGAATTTCCACATGTTCCGTTGTGTTGCAAGATATGGTTACAAAGACCTCCATAAGAAAGATGATGATTTTGAGAAAAAGCTCTTCGATAATCTCTTCATGTTTCAATCAAGGGACTGCCTGTTGAATGATAATGGCAACACTAATTCCTCCAACTTGGACCTGACAATTTCATCAGTGGATTCAATTGGTGATGAGTTGGAATTCATGAACAACTGTAGATCTGCAGGGGTGGTGCACATACTGGGAAACACGGTAGTGAGAGCTAGGAGGGATTCAAGATTCTACAAGAAGATAGCTGTTGATTATATATATGCATTTCTCAGGAAGATATGTAGGGAGAACAGTGTGATCTTTAATGTTCCTCACGAGAGTCTTTTGAACGTTGGGCAGATATTCTATGTTTAA 2232 42.7 MASGIEFEEDSENKGSMWVLDQKLDQPMDEEAGRLRNMYREKKFSAVLLLRLAFQSLGVVYGDLGTSPLYVFYNTFPRGIEDPEDVVGALSLIIYSLTLIPLLKYIFVVCRANDNGQGGTFALYSLLCRHAKINTIPNQHRTDEELTTYSRTTFHEHSYAAKTKRWLEGHASRKNMLLILVLVGTCMLIGDGILTPAISVLSAAGGIKVDHPGMSNEIVVLVAVVILVGLFSMQHYGTDRVGWLFAPIVLLWFLVIGGIGIFNIWKYDSSVLKAFSPVYIYRYFKRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAVQLAFTVVVFPCLLLAYSGQAAYLVKNQDHVVDAFYRSIPDSIYWPVFVVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDINWVLMVLCIAVTAGFKNQSQIGNAYGTAVVIVMLATTFLMILIMLLVWRCHWLLVLIFTGLSLAVECTYFSAVLFKVDQGGWVPLVIAAAFLIIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFDNLFMFQSRDCLLNDNGNTNSSNLDLTISSVDSIGDELEFMNNCRSAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV* 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1316103 1326207 - Vvi1g134 Vvi1g134 769334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g134 743 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 6 656 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g134 743 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 666 742 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g134 743 TIGRFAM kup: potassium uptake protein 52 742 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g134 743 Pfam K+ potassium transporter 53 624 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g134 743 PANTHER POTASSIUM TRANSPORTER 6 656 - -
Vvi1g134 743 PANTHER POTASSIUM TRANSPORTER 666 742 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g134 K03549 - vvi:100264706 1424.45