Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g143 ATGGGGAGCTTTGTGGTGCAGTTCCCCAGCAAATTGAGGAACTTCACAGTTTGGGCTTCACCCAACAATGGGGTCCCATTTGATTCTCCGCAGTCCAGAGGGCCAGTGATTTTGGAACTCCCACTCGATAAGATTCGGAGACCACTGCTGCGTACCAGATCCAATGATCCAGAAAAAGTGAAGGAACTCATGGAAAGTATCAGAGAAATTGGCCTCCAAGTACCGATTGATGTGCTTGAGGTTGATGGAGCTTACTATGGTTTTTCCGGTTGTCATCGGTACGAAGCACACCAGCGCCTAGGGCTCCCAACAATTCGTTGCAAAGTTCGACGAGGAACGAAAGAAACATTGAGGCATCACCTCCGCTGA 369 49.32 MGSFVVQFPSKLRNFTVWASPNNGVPFDSPQSRGPVILELPLDKIRRPLLRTRSNDPEKVKELMESIREIGLQVPIDVLEVDGAYYGFSGCHRYEAHQRLGLPTIRCKVRRGTKETLRHHLR* 123
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1425249 1426536 + Vvi1g143 Vvi1g143 769343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g143 122 Pfam ParB/Sulfiredoxin domain 39 115 IPR003115 -
Vvi1g143 122 Gene3D - 35 122 - -
Vvi1g143 122 SUPERFAMILY ParB/Sulfiredoxin 18 121 IPR036086 -
Vvi1g143 122 CDD Srx 37 121 - -
Vvi1g143 122 SMART ParB_7 38 117 IPR003115 -
Vvi1g143 122 PANTHER UNCHARACTERIZED 2 122 IPR016692 GO:0032542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g143 K12260 - vvi:100245605 253.062