Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g144 ATGGCAAAATCAAGGCAGCATTTTGCTAACCAGGATGCATCATTGTCACCCACTGCTGGAAGATCAAGGGAATGGGATGGCCCATCAAGATGGTCTGAATACTTAAATTTGCAAGTGACTTCCCCGATGACAGCTAGGAGTCACAGGAATGTGAGTTCTGATGGACAGGCTCAGAGTTCAAGCGGGTCACATAAGGGTTTGAACATGCAGTATGTAGTTCAACTTACCCAAGTTGCTGAAGGCCTAATGGCTAAAATGTATAGATTGAATCAAATCTTGGACTTCCCAGACTCGGTGAATCATGTATTTTCAGAAGCATTTTGGAAGGCAGGTGTTTTCCCCAACTGTCCCAGGATTTGTGTATTGCTCTCAAAGAAGTTTCCAGAGCATCATATCAAATTGCAACTGGAACGTGTTGATAAGGTTGCTTTAGATGCACTGCATGAAAATGCTGAAGTTCATTTACAAAGCTTAGAGCCATGGGTTCAGCTGCTTCTTGACTTGATGGCATTTCGGGAACAAGCTTTGCGACTTATATTGGATCTAAGCAGCACAGTTATTACCTTGTTACCTCATCAGAACTCACTCATACTACATGCGTTCATGGATCTCTTTTGTTCCTTTGTCCGTGTTAATCTCTTTTCTGAGAAGGCAAGTCCACTTCATGCTATGCCAAGGAAAATGATGCTGCAAATGTATAACCTTTTGCATGCCATGTCAAGAAATGATAGAGATTGTGATTTTTATCATCGGTTGGTTCAATTCATAGACTCTTATGATCCACCATTGAAGGGGTTACATGAAGATTTGAATTTTGTGAGCCCCCGTATTGGAGAGGTTTTAGAGGCTGTGGGTCCTATTATTTTCCTATCCACGGATACAAGGAAGTTGAGAAATGAGGGTTTTTTAAGTCCATTTCATCCTCGATATCCAGACATTCTCACAAATTCTGCTCACCCAATGAGAGCTCAAGATTTAGCAAATGTTACTTCTTATCGGGAATGGGTACTACTTGGATATCTTGTTTGTCCAGATGAGCTACTTCGTGTCACTAGCATTGACATTGCTTTGGTGGTGCTGAAGGAAAATTTAGTTCTTACATTATTCAGGGATGAGTATGTGCTATTGCATGAGGATTATCAATTATATGTTTTGCCACGGATACTGGAATCAAAGAAAATGGCAAAATCTGGACGCACCAAGCAAAAAGAAGCTGACCTAGAGTATAGTGTCGCAAAGCAGGTTGAGAAAATGATAAGTGAAGTGCATGAGCAAGCAATACTATCTTGTGATTCCATACATCGTGAGAGGAGAATATTATTAAAGCAAGAAATTGGAAGAATGGTGCTCTTTTTTACTGATCAGCCAAGTTTATTGGCTCCAAATATTCAGATGGTATTTTCTGCCTTGGCTTTGGCTCAATGTGAAGTCTTGTGGTATTTCCAACATGTAGGAATTGCATCATCGAAATCCAAAACTGCTAGAATGGTACCAGTTGATATAGATCCAAGTGATCCAACTATCGGGTTCTTGTTGGACGGAATGGATCATCTTTGCTGTCTTGTTCGCAAGTATATAGCAGCAATTAGGGGATATGCATTATCATTTCTTTCATCTTGTGCTGGGAGAATCCGGTTTTTGTTGGGTACTCCAGGAATGGTGGCTCTTGACCTGGATGCAAACTTGAAAGGACTTTTTCAGAAGATAGTTCAGCATCTTGAAAACATACCAAAACCACAGGGTGAAAATATTTCTGCCATCACATGCAATTTATCCGAGCTGCGTAAAGATTGGTTGTCAATATTGATGATTGTCACATCTGCTCGATCATCTATAAACATAAGGCATTTGGAGAAAGCAACAGTCTCAACTGGGAAGGAAGGCTTATTATCAGAAGGAAATGCTGCATACAATTGGTCTAGATGTGTTGATGAACTGGAATCTCAGCTATCAAAGCATGGCAGTCTTAGAAAACTGTATTTCTACCATCAGCACCTTGCAGCAGTATTCAGGAACACCATGTTTGGACCGGAAGGGCGTCCTCAGCATTGCTGTGCATGGCTTGGTGTGGCTAGTAGTTTTCCAGAGTGTGCTTCTTCAATTGTTCCTGAGGAGATAACTAAAATTGGCCGAGATGCAGTTCTGTATGTAGAATCTCTCATTGAATCCATCATGGGAGGATTGGAAGGATTAATCAATATTCTTGATTCTGAAGGTGGATTTGGCTCTCTAGAGATGCAGCTTCTTCCAGAGCAGGCAGCTGTGTTCATGAATTATGCATCAAGAGTTTCAATTCCTTCATCAAAACTTCCAAGAGGAGTGGCTGGTTTTCTTTTGCCTGGTCATGAGAGCTATCCTGAAAATAATAATTCTATCAAAATGTTAGAAGCTGCAATGCAGAGGTTGACAAATTTGTGTTCAGTCTTGAATGATATGGAGCCTATATGTGTTCTGAACCATGTCTTTGTTCTGAGGGAGTATATGAGAGAATGCATCCTTGGGAACTTCAGAAGGAGACTGCTTACTGTACTAAAAACTGATAATGATCTTCAACGACCTTCTGTTCTGGAATCGCTGCTTCACAGACATATCAGCATAGTCCATCTAGCAGAGCAGCACATTAGCATGGACCTAACCCAGGGAATCAGAGAAGTTTTACTCTCGGAGGCCTTTTCAGGGCCAGTTTCTTCTCTGCATTTGTTTGAGAAACCAGCTGATCTAAATACTGGATCAGCAGCTGAAGCGGTTTGCAACTGGTACATTGAGAACATTGTGAAGGATATATCAGGTGCTGGAATCCTTTTTGCACCAGTCCACAAATGCTTCAAGAGTACGAGGCCTGTGGGTGGATACTTCGCCGAATCAGTTACTGATCTTAGAGAGTTGCAATCTTATGTTCGTATTTTTGGTGGCTATGGAGTGGACAGGCTAGACAGAATGATGAAAGAACATACAGCTGCACTTTTAAATTGCATTGACACATCATTGAGGTCAAACCGTGAGGTGCTAGAGGCAGTTGCTGCAGGCATGCATTCTGGTGATCGTACAGAGAAAGAGTCGTATTTGAGGCAGATAGTGGATATGGACACAATAATTGGGTTCTGTATTCAGGCAGGGCAAGCACTGGCCTTTGATCAACTACTGGCAGAAGCTGCTGGAGCTGTTCTTGAAGAAGGTGTGCCCTTGATATATTCATTATTATCTGGGGTTGTTAAGGATCTACCCGATGAAATACCTGAAAAGAAGGAAATAAGGAGGATGAGGGTGGTGGCAAACAGTGTTAATTTAGTTAGTGATCATGATTCTGAGTGGGTGAGAATGATTTTAGAAGAAGTTGGAGGTGCAAATGATGGTTCTTGGAGCTTGTTACCGTATTTATTTGCTGCCTTCATGACATCCAATATCTGGAGCTCTACTGCCTTCAACGTTGATACTGGTGGCTTCAACAACAATATCCATTGCTTGGCCAGGTGCATCAGTGCTGTGATTGCTGGAAGTGAGTTTGTCAGGTTGGAAAGAGAACATCATCAGAAAAGTTCTCTCTCAAATGGGCATGTTGCTGCTACTTTTGATTCTGAAATACAGAGCCGATTGTCAACTGAAGCAAGCATAAAGTCTGCAATGCAGATCTTTGTTAAATTTTCTGCAGGAATAATACTAGATTCTTGGAGTGAAACTAACAGGTCTAATCTTGTTCCAAAGCTTATCTTCCTGGACCAACTTTGCGAGATCTCGTCATACCTTCCAAGAAGCTCACTTGAACCCCATGTTCCCTATGCCATTCTGCGATCAATATATGGCCAGTACTATGCAAATTCCCCATCTGCACAGCTGGCATTACTGAGCATATCACCTCGCCACTCACCTGCCGTCTCTCTGGCACATGCATCTCCAGGGTTCCGGCAGCTCCGTGGCGACTCTACTCCTCAGTCAAGTGCTACTGATTCAGGTTATTTCAGGGGATCATCAACATATAGCCAGGAACATTCTTACGCTCCTGATAGTGGAACCATTCGGAGCAGTGACAGTAGGCATCGGAATGTTCGCCGCTCTGGTCCATTGGATTATAGCTCAAGCCGTAAAGTTAAGTATGCTGAAGGATCAACTTCTGGGAGTACCGGTCCCAGCCCACTACCTAGGTTTGCGGTATCAAGATCGGGTCCTATATCATACAAGTAA 4179 42.33 MAKSRQHFANQDASLSPTAGRSREWDGPSRWSEYLNLQVTSPMTARSHRNVSSDGQAQSSSGSHKGLNMQYVVQLTQVAEGLMAKMYRLNQILDFPDSVNHVFSEAFWKAGVFPNCPRICVLLSKKFPEHHIKLQLERVDKVALDALHENAEVHLQSLEPWVQLLLDLMAFREQALRLILDLSSTVITLLPHQNSLILHAFMDLFCSFVRVNLFSEKASPLHAMPRKMMLQMYNLLHAMSRNDRDCDFYHRLVQFIDSYDPPLKGLHEDLNFVSPRIGEVLEAVGPIIFLSTDTRKLRNEGFLSPFHPRYPDILTNSAHPMRAQDLANVTSYREWVLLGYLVCPDELLRVTSIDIALVVLKENLVLTLFRDEYVLLHEDYQLYVLPRILESKKMAKSGRTKQKEADLEYSVAKQVEKMISEVHEQAILSCDSIHRERRILLKQEIGRMVLFFTDQPSLLAPNIQMVFSALALAQCEVLWYFQHVGIASSKSKTARMVPVDIDPSDPTIGFLLDGMDHLCCLVRKYIAAIRGYALSFLSSCAGRIRFLLGTPGMVALDLDANLKGLFQKIVQHLENIPKPQGENISAITCNLSELRKDWLSILMIVTSARSSINIRHLEKATVSTGKEGLLSEGNAAYNWSRCVDELESQLSKHGSLRKLYFYHQHLAAVFRNTMFGPEGRPQHCCAWLGVASSFPECASSIVPEEITKIGRDAVLYVESLIESIMGGLEGLINILDSEGGFGSLEMQLLPEQAAVFMNYASRVSIPSSKLPRGVAGFLLPGHESYPENNNSIKMLEAAMQRLTNLCSVLNDMEPICVLNHVFVLREYMRECILGNFRRRLLTVLKTDNDLQRPSVLESLLHRHISIVHLAEQHISMDLTQGIREVLLSEAFSGPVSSLHLFEKPADLNTGSAAEAVCNWYIENIVKDISGAGILFAPVHKCFKSTRPVGGYFAESVTDLRELQSYVRIFGGYGVDRLDRMMKEHTAALLNCIDTSLRSNREVLEAVAAGMHSGDRTEKESYLRQIVDMDTIIGFCIQAGQALAFDQLLAEAAGAVLEEGVPLIYSLLSGVVKDLPDEIPEKKEIRRMRVVANSVNLVSDHDSEWVRMILEEVGGANDGSWSLLPYLFAAFMTSNIWSSTAFNVDTGGFNNNIHCLARCISAVIAGSEFVRLEREHHQKSSLSNGHVAATFDSEIQSRLSTEASIKSAMQIFVKFSAGIILDSWSETNRSNLVPKLIFLDQLCEISSYLPRSSLEPHVPYAILRSIYGQYYANSPSAQLALLSISPRHSPAVSLAHASPGFRQLRGDSTPQSSATDSGYFRGSSTYSQEHSYAPDSGTIRSSDSRHRNVRRSGPLDYSSSRKVKYAEGSTSGSTGPSPLPRFAVSRSGPISYK* 1393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1426625 1460682 - Vvi1g144 Vvi1g144 769344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g144 1392 PANTHER MEMBRANE-ASSOCIATED PROTEIN HEM 63 1277 - -
Vvi1g144 1392 PANTHER NCK-ASSOCIATED PROTEIN 1 63 1277 IPR019137 -
Vvi1g144 1392 Coils Coil 792 812 - -
Vvi1g144 1392 MobiDBLite consensus disorder prediction 1 27 - -
Vvi1g144 1392 MobiDBLite consensus disorder prediction 1303 1338 - -
Vvi1g144 1392 Pfam Nck-associated protein 1 75 1271 IPR019137 -
Vvi1g144 1392 MobiDBLite consensus disorder prediction 1362 1379 - -
Vvi1g144 1392 MobiDBLite consensus disorder prediction 1 18 - -
Vvi1g144 1392 MobiDBLite consensus disorder prediction 1300 1392 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g144 K05750 - vvi:100264488 2720.65