Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g146 | ATGGTGATAATTCGGTGGTGCGCACCACCGCCAACTCTCCTGCTCCCTCACCATCCCACCGCACGTTTCTCCTGTCCCAAACCTCCATCCGTCGTCTATGCAAAATCATCTTCTCCTGCTTCTTCTTCGACAACGAGAAGAGCTCTATCTCTTTCTCTAATCTTCTCATCATTCACTTGTTCTTATTATTCTTCTTCAGAAGCTGCCACTTCTGAGTTCTTCGAGCTCCAAGGTTCGGGTGGTGTCAAGGCATTGGACCTCCGAACTGGTTCCGGTGAGGTTCCCGTGGATGGCGACCAGGTTGCAGTTCATTACTATGGAAGATTGGCAGCTAAACAAGGATGGCGTTTTGATTCAACATATGATCACAAAGATGAAACGGGTGAACCGATTCCTTTTGTCTTCACCCTTGGGTCTGGGAAAGTTATTTCAGGGATTGAAGCTGCTGTGAGATCTATGAAAGTAGGGAGCATTCGTCGAGTCATCATCCCACCATCCCAAGGATATCAGAACACATCCCAAGAGCCCATACCACCCAATTTTTTCGACAGGCAGAGATTATTTACCACCATTTTTAATCCAACCCGTCTTGCAAATGGAGAAGGCTCGACGTTGGGGACTCTCATATTTGATATTGAATTGGTCAGCCTGAAGCACCCATGA | 663 | 47.21 | MVIIRWCAPPPTLLLPHHPTARFSCPKPPSVVYAKSSSPASSSTTRRALSLSLIFSSFTCSYYSSSEAATSEFFELQGSGGVKALDLRTGSGEVPVDGDQVAVHYYGRLAAKQGWRFDSTYDHKDETGEPIPFVFTLGSGKVISGIEAAVRSMKVGSIRRVIIPPSQGYQNTSQEPIPPNFFDRQRLFTTIFNPTRLANGEGSTLGTLIFDIELVSLKHP* | 221 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 1495866 | 1499100 | + | Vvi1g146 | Vvi1g146 | 769346 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g146 | 220 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 98 | 218 | IPR001179 | GO:0003755 | |
| Vvi1g146 | 220 | SUPERFAMILY | FKBP-like | 79 | 218 | - | - | |
| Vvi1g146 | 220 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 94 | 215 | IPR001179 | GO:0003755 | |
| Vvi1g146 | 220 | Gene3D | - | 61 | 217 | IPR046357 | GO:0003755 | |
| Vvi1g146 | 220 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-1, CHLOROPLASTIC | 29 | 219 | IPR044197 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi1g146 | - | - | vvi:100262776 | 382.874 |