Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g15 ATGTCTATCAAATATCTCCATGATAATCCAAAAGCCCTTCAACAACTTAGAGAAGAGCATTTAGCCATTCGCAAAGGAAAAAGCCCAGAGGATCCAATCGGCTGGACCGAGTACAAATCCATGACCTTCACTCGAGCTGTGATCCTTGAGACCTCCAGATTGGATACCATAGTTAATGGAGTATTGAGGGAGACAACCAATGATATTGAAGTGAATGGATATGTCATTCCAAAAGGATGGATGATATATGTTTATACAAGGGAGACCAACTATGATCCACTGCAGTATCCAGAGCCTTTCACCTTCAATCCATGGCGATGGCTGGATAAGAGCCTGGAGTCTCAGAATTACTGCTTCCTGTTTGGAGCAGGAAACCGAGTTTGTCCAGGAAAGGAATTGGGAATTGTTAAGATCTCTATGTTCCTTCACCACCTTGTTACCAGATACAGGTGGGAAGAAGTTGGGGATGCTGAAATTGCCAAGTTCCCAAGAGTTGAAGCACCAAAGGGCCTGCATATAAAGATAACTAAGTACTAG 537 43.2 MSIKYLHDNPKALQQLREEHLAIRKGKSPEDPIGWTEYKSMTFTRAVILETSRLDTIVNGVLRETTNDIEVNGYVIPKGWMIYVYTRETNYDPLQYPEPFTFNPWRWLDKSLESQNYCFLFGAGNRVCPGKELGIVKISMFLHHLVTRYRWEEVGDAEIAKFPRVEAPKGLHIKITKY* 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 263081 269275 - Vvi1g15 Vvi1g15 769215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g15 178 Gene3D Cytochrome P450 1 165 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g15 178 PRINTS E-class P450 group I signature 45 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g15 178 PRINTS E-class P450 group I signature 85 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g15 178 PRINTS E-class P450 group I signature 118 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g15 178 PRINTS E-class P450 group I signature 128 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g15 178 Pfam Cytochrome P450 5 155 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g15 178 PANTHER CYTOCHROME P450 85A-LIKE 1 176 - -
Vvi1g15 178 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 121 130 IPR017972 GO:0005506|GO:0016705
Vvi1g15 178 SUPERFAMILY Cytochrome P450 3 176 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g15 178 PANTHER CYTOCHROME P450 26 1 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g15 K09590 - vvi:100262943 376.326