Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g151 ATGGAGAGCAGTGAAGAAGAAGACGATTTGGACTACCCAATCAATGATGGCATCACTCCCCAATCCAAGATTGACTCCATCTATCAGTCCAATACCGAAAAGGGAATCAGAAAGCTTTGTTGTGAGCTCTTAGTTTTGAAGGATGCGGTGGAAAACTTACGTGGGAATATGCGTACTAAGTACTTGGCTTTCCTGAGGATATCTGATGAAGTTGTTGAAATGGAGCATGAGTTAATTGAGCTGCAAAAGCATATTTCTGCACAAGGGATTCTTGTGCAGGATTTGATGAGTGGTGTGTGCCGTGAATTGGAAGAGTGGAACAAAGCTAATGGTGATATTCATGAAGCTCAACAAGATCCTCAAATTGGTGAACTTCAAGATCCTTTTCCAAATAACATAGTTGATGCCAAGACAATATTCTTGGAGAAAATTGATGTTCTCTTGGCTGAACATAAAGTGGAAGAAGCAATAGAGGCTTTAGATGCGGAAGAGAGAAATTCTCCAGACTTGAAAAGCTCGGGAGATACTTCACCTACTGAAGCATCTTCTTACAGGTCTGCTTTCTTGAAAAGAAAGGCAATGCTTGAGGATCAGCTAGTTGAGATCACTGAACAACCTTTAGTTGGTACCCTGGAACTGAAGAAGGCTCTATCTGGTTTGATAAAACTGGGAAAAGGTCCTTTGGCACATCAGCTACTTCTAAAATCATATGGTTCACGCCTCCAAAAGAGCATTGAGGCTTTTCTTCCTGCATGTTCTAGCTGCCCCAAAACATATTCAGCCACCTTATCTAAGCTTGTATTTTCTCTGATCTCATTGACAACAAAAGAATCAGGTTCAATATTTGGTGATGATCCCGCTTATACCAACAGAATTGTTCAGTGGGCAGAGTGGGAAATTGAATCTTTTGTACGACTAGTGAAGGAGAATGCACCCCCTTCAGAGTCCATTTCTGCTCTACGTGCAGCTAGCATTTGCATTCAGGCTAGTCTGAGCCACTGCTCACTGTTGGAATCACAAGGCCTGAAACTCTCAAAGTTGCTTATGGTGCTCTTGCGGCCATATATTGAAGAAGTTTTGGAGTTAAATTTTAGACGGGCTAGAAGAGTGATTCTTGACTTGGATGCAATTGATGAAAGCTTCCCATTGTCACCCTGCTTTGCATCTCCATTGTCTGCTTTTGCAACATCATCAGATACCATGCTCATTGACAGCGGAATCAGGTTTATGTACAATGTCAATGAAATAGTGGAACAGCTAACCCCACTCACCATTTTGCACTTTGGAGGAAGCATATTAACTAGAATTTCACAGCTGTTTGCTAAATACGTGGGTGTTCTAATTAAAGCCTTACCTGGCCCCTCTGAAGATGATAATCTTACAGAGCTGAAAGAGGACATACCCTTCAGGGCTGAAACAGATGCACAACAGCTTGCACTTTTGGGAATAGCATTTACTGTGGCAGAGCTATTACCGATGGCTATATGGAGAACACAGAATGAATGCAAGGAACCAGGTAGTGGACCCACTGAAAACATTGTGCATACTGCAAGTGCCATGGAATCTAAGGAATGGAGGCGCCATATTCAGCATTCATTGGATGAGCTTAGAGATCACTTCTGTCGACAATATGTTTTGAATTTTATCTATTCAAGGGAAGGGAAAACACAATTGAATGCACAAATTTATTTAAATGGGAAAGGAGATGACCTGAGTTGGGACTCTGGCCCACTGCCTTCACTGCCTTTCCAGATGTTATTTGTGAAGCTGCAGCAGTTAGCAACTGTGGCTGGAGATGTATTACTTGGAAAGGAGAAAATACAGAAAATTTTGCTTGCCAGGCTAACAGAGACAGTGGTAATATGGTTGTCTGATGAACAGGAATTCTGGGGTGTATTTGAGGATGAGTCAGCTCCCCTTCGGCCAATCGGGTTGCGGCAGTTGATTCTTGATATGCACTTCACCGTTGAAATTGCACGTTTTGCTGGTTACTCATCACGACATGTGCACCAGATTGCAGCAGCCATAATTGCTCGTGCCATTAGGACCTTCTCTGCTAGAGGCATAGACCCACAAAGTGCACTCCCTGAGGATGAATGGTTTGTGGAAACTGCCAAAGGAGCAATACACAAGCTTATGTCAGACGCTTCAGACACTGATGATGAACACATCATTGATGAACACCTCATTGACGAACACATGATTATGCATGATGAGATGGCCTCTGATTCTGATGACAGTCCGTCTTCCCTTTCATCAGTAGAAAGTTCCGAGTCGTTTGCTTCTGCAAACATGGGTGACTTAGAAAGCCCCACTGACTTGACTGATCCTGAGAACTGA 2340 42.91 MESSEEEDDLDYPINDGITPQSKIDSIYQSNTEKGIRKLCCELLVLKDAVENLRGNMRTKYLAFLRISDEVVEMEHELIELQKHISAQGILVQDLMSGVCRELEEWNKANGDIHEAQQDPQIGELQDPFPNNIVDAKTIFLEKIDVLLAEHKVEEAIEALDAEERNSPDLKSSGDTSPTEASSYRSAFLKRKAMLEDQLVEITEQPLVGTLELKKALSGLIKLGKGPLAHQLLLKSYGSRLQKSIEAFLPACSSCPKTYSATLSKLVFSLISLTTKESGSIFGDDPAYTNRIVQWAEWEIESFVRLVKENAPPSESISALRAASICIQASLSHCSLLESQGLKLSKLLMVLLRPYIEEVLELNFRRARRVILDLDAIDESFPLSPCFASPLSAFATSSDTMLIDSGIRFMYNVNEIVEQLTPLTILHFGGSILTRISQLFAKYVGVLIKALPGPSEDDNLTELKEDIPFRAETDAQQLALLGIAFTVAELLPMAIWRTQNECKEPGSGPTENIVHTASAMESKEWRRHIQHSLDELRDHFCRQYVLNFIYSREGKTQLNAQIYLNGKGDDLSWDSGPLPSLPFQMLFVKLQQLATVAGDVLLGKEKIQKILLARLTETVVIWLSDEQEFWGVFEDESAPLRPIGLRQLILDMHFTVEIARFAGYSSRHVHQIAAAIIARAIRTFSARGIDPQSALPEDEWFVETAKGAIHKLMSDASDTDDEHIIDEHLIDEHMIMHDEMASDSDDSPSSLSSVESSESFASANMGDLESPTDLTDPEN* 780
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1529722 1536715 + Vvi1g151 Vvi1g151 769351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g151 779 PANTHER EXOCYST COMPLEX COMPONENT 8 1 779 IPR033961 GO:0000145|GO:0006887
Vvi1g151 779 SUPERFAMILY Cullin repeat-like 140 360 IPR016159 -
Vvi1g151 779 MobiDBLite consensus disorder prediction 739 779 - -
Vvi1g151 779 MobiDBLite consensus disorder prediction 745 769 - -
Vvi1g151 779 Coils Coil 146 166 - -
Vvi1g151 779 Gene3D - 137 247 IPR042561 -
Vvi1g151 779 PANTHER EXOCYST COMPLEX COMPONENT EXO84C 1 779 - -
Vvi1g151 779 Gene3D - 255 359 IPR042560 -
Vvi1g151 779 MobiDBLite consensus disorder prediction 159 181 - -
Vvi1g151 779 Pfam Exocyst component 84 C-terminal 141 344 IPR032403 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g151 K19986 - vvi:100249093 1476.84