Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g152 ATGGATGCAATCGAAGAGAGAGTTGCGGAGAAGGAAAGCGGTGGATGCATCGATCTGTGCCTTGGCGAAGCAGTAGTGGATCTGACTGGCCACATTCATCAGCTCCCATGCTGCATCAAGTACAACGGACCTTGTTCTGTTTCTCACTATTTCAAACCTAAACATACCGGGATAGAGGTTGAGGGTTTGAAGGTGGAGGAGGCCTTCTTTAGGGGAAGAAAGTTGCAGGGAACCACTATTCACCTTCCGGAGGGCTATTCTGGCTTTGTCCTAGGAAAAAAGAGTTCCAACACGACAAAATCTACTGGCACATCTGAAGGAAACATGAACAGATGGGAAACAAATGCAAAATTTCAGGCGATAACATTTTGGAATCATGACAATCTTCCTTCACAAGATGATTCTTATGTGCGGTCATTTCACTGGTTGGCTGTTTCCAAAGCACTGCATAAGCCAGCGATGGCTGAAGATTTGAGGGTTGCATCTCTTGCCCTGGAGCAAGAGTTGTGTACATCAGAAAAGTGA 525 45.9 MDAIEERVAEKESGGCIDLCLGEAVVDLTGHIHQLPCCIKYNGPCSVSHYFKPKHTGIEVEGLKVEEAFFRGRKLQGTTIHLPEGYSGFVLGKKSSNTTKSTGTSEGNMNRWETNAKFQAITFWNHDNLPSQDDSYVRSFHWLAVSKALHKPAMAEDLRVASLALEQELCTSEK* 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1537353 1545134 + Vvi1g152 Vvi1g152 769352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g152 174 CDD RNase_H2-C 33 127 IPR013924 GO:0006401|GO:0032299
Vvi1g152 174 PANTHER OS02G0168900 PROTEIN 23 160 - -
Vvi1g152 174 Gene3D - 5 155 - -
Vvi1g152 174 Pfam Ribonuclease H2 non-catalytic subunit (Ylr154p-like) 32 149 IPR013924 GO:0006401|GO:0032299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g152 K10745 - vvi:100252517 356.295