Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g153 ATGTCTTCGACAACTCCTCATCACGATGCAGAAGAACCCCCCCAGTTGCAGTCGAAGGATGGCAAGTTGATGGCTACGTTTAATCCCAGACAGCTGAACGTTATCTGGGGCAGAGACCCCCGCTACTGGAAGATGCCAGAAAAGAACAGCGGCGGTCCTGCAGAACTATTGCAGGTATGCTGGCTTGAAGTGAGCGGCAGTGTCCCCATACGCAGCGCACCAATTGGAACCAAGTTCAAAATTACCTTCCAAGTATCCTTCAAATCCGATGCATTTGGATGGAATAACTGTCCCGTTTATGTGATGGCTAAGTTTGGGAAGAAAGGAAAGTACACGTGGACGAAAATATCGCTGCGTACTGACAATTCACAGCCAACCAATATCCTCCCACCTGACGGCCTGGAGATTGTAACCAAAGAGGCTACAACCGCAAATGTAAATGATACCATTTACTTTGGCCTATATGAAGTATGGAGTGGGAAGTGGAAGGGAGGATTAGAACTTCATAATGCCATGGTTGAACAAATCAATAATAAATAG 540 46.48 MSSTTPHHDAEEPPQLQSKDGKLMATFNPRQLNVIWGRDPRYWKMPEKNSGGPAELLQVCWLEVSGSVPIRSAPIGTKFKITFQVSFKSDAFGWNNCPVYVMAKFGKKGKYTWTKISLRTDNSQPTNILPPDGLEIVTKEATTANVNDTIYFGLYEVWSGKWKGGLELHNAMVEQINNK* 180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1547238 1548537 + Vvi1g153 Vvi1g153 769353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g153 179 PANTHER PROTEIN PHLOEM PROTEIN 2-LIKE A9 17 173 - -
Vvi1g153 179 MobiDBLite consensus disorder prediction 1 23 - -
Vvi1g153 179 PANTHER - 17 173 - -
Vvi1g153 179 Pfam Phloem protein 2 26 171 IPR025886 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g153 - - vvi:100243937 380.948