Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g154 ATGCAGAAGAACCCCCCCCAGTTGCAGAGGAAGGATGGCAAGATGAAGGCTACGTTTAATCCCAGACAGCTGAACGTTAGCTGGGGCAGAGACAGCCGCTACTGGAAGATGCCAGGAAAGGGCAGCAACCGTCCTGCAGAACTATTGCGGGTATGCTGGCTTGAAGTGAGCGGTAGTGTCCCCATAGGCAGCGTACCACCTGGAACCAAGTACAGAATTACCTTCCAAATATCCTTGAAATCCGATGCATTTGGATGGAATGACTGTCCCGTTTATGTGATGGCTAAGTTTGGGAAGGAAGGAAAGAACAGTTGGAAGAAAATATCGCTGCAAGCTCACTATTCAGAGCCAACCAGTATCCCCTCAACTGAGGGCCTAGAGATTGAAACCGAAGATGCAAATGATACCATTTACTTTGGCCTATATGATATATGGACTGGGCACTGGAAGGGAGGATTACAACTTCATAATGCCACGGTTGAACAAATCAATAATATACGGTAA 504 47.22 MQKNPPQLQRKDGKMKATFNPRQLNVSWGRDSRYWKMPGKGSNRPAELLRVCWLEVSGSVPIGSVPPGTKYRITFQISLKSDAFGWNDCPVYVMAKFGKEGKNSWKKISLQAHYSEPTSIPSTEGLEIETEDANDTIYFGLYDIWTGHWKGGLQLHNATVEQINNIR* 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1551755 1553292 + Vvi1g154 Vvi1g154 769354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g154 167 Pfam Phloem protein 2 17 160 IPR025886 -
Vvi1g154 167 PANTHER - 10 160 - -
Vvi1g154 167 PANTHER PROTEIN PHLOEM PROTEIN 2-LIKE A9 10 160 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g154 - - vri:117914499 260.381