Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g155 ATGTCTTCGACAGCTCCTCATCACGATGCAGAAGACCCCCCCCAGTTGCAGTCGAAGGATGGCAAGCTGATGGCTACGTTTAATCCCAGACAGCTGAACGTTATCTGGGGCGGAAACCTCCGCTACTGGAAGATGCCAGAAAAGAACAGCGGCAGTCCTGCAGAACTATTGCAGGTATGCTGGCTTGAAGTGAGCGGCAGTGTCCCCATACGCAGCGCATCAATTGGAACCAAGTTCAGAATTACCTTCCAAGTATCCTTCAAATCCGATGCATTTGGATGGAATAACTGTCCCGTTTATGTGATGGCTAAGTTTGGGAAGAAAGGAAAGTACGCGTGGACGAAAATATCGCTGCGTACTGACTATTCACAGCCAACCAATATCCTCCCACCTGAGGGCCTGGAGATTGTAACCAAAGATGCTCCAAATGTAAATGATACCATTTACTTTGGCCTATATGAAGTATGGAGTGGGAAGTGGAAGGGAGGATTAGAACTTCATAATGCCACGGTTGAACAAATGAATAATAAATAG 534 46.82 MSSTAPHHDAEDPPQLQSKDGKLMATFNPRQLNVIWGGNLRYWKMPEKNSGSPAELLQVCWLEVSGSVPIRSASIGTKFRITFQVSFKSDAFGWNNCPVYVMAKFGKKGKYAWTKISLRTDYSQPTNILPPEGLEIVTKDAPNVNDTIYFGLYEVWSGKWKGGLELHNATVEQMNNK* 178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1558081 1561472 + Vvi1g155 Vvi1g155 769355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g155 177 MobiDBLite consensus disorder prediction 1 20 - -
Vvi1g155 177 PANTHER PROTEIN PHLOEM PROTEIN 2-LIKE A9 15 171 - -
Vvi1g155 177 Pfam Phloem protein 2 26 171 IPR025886 -
Vvi1g155 177 PANTHER - 15 171 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g155 - - vvi:100243937 340.887