Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g157 ATGACTCATGAACAAAGAGAAGGAGGTTACTCCAGCCCACATTGGAAAGGCGATGGTTCTACACTTGACCAAAGTTTCTCAGGATTGATTAAAGTCCCTGTTAAGGCTCTAGACATCACATGGGGTAATGATACTCGGTTTTGGCAACAGATAGATCTTACGGATCATGATACCCAGGAGATCGGATTCAAGGAAGGTATGCTGCTCCTTCAGGTGAATTGGATTGAAGTCAAAGGAAATCTGAATATCACTCCCACTGAGGACACAAAATATGAAATATATTATATGGTCAAGTTCAGGGTTGATGCATTTGGTTGGCATTCAGCTCCTATCAAGTTCAAGGTGAGACACAAAGGAGAAGAGACACACAGTAACATTATGATATTGGAGTCCTACAGAGAGAAACATGATGTGTGGCATGAAATTCCAGGTGGTGAATTCTCAGTTGCATCAAAGGACCCTGTGAATGTTGAATTTGGTATCTTTGAAGTTGATAGTGACTGGTGGAAGGGTGGTATGGTTCTTGGAGGAGTTAAGATTAAGGCAAAATCAGGTTGA 558 41.58 MTHEQREGGYSSPHWKGDGSTLDQSFSGLIKVPVKALDITWGNDTRFWQQIDLTDHDTQEIGFKEGMLLLQVNWIEVKGNLNITPTEDTKYEIYYMVKFRVDAFGWHSAPIKFKVRHKGEETHSNIMILESYREKHDVWHEIPGGEFSVASKDPVNVEFGIFEVDSDWWKGGMVLGGVKIKAKSG* 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1563529 1564825 + Vvi1g157 Vvi1g157 769357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g157 185 Pfam Phloem protein 2 33 181 IPR025886 -
Vvi1g157 185 PANTHER - 24 180 - -
Vvi1g157 185 PANTHER - 24 180 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g157 - - vri:117915543 388.267