Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g159 ATGGGCAGGTCTCTTCTCTCCTCTACGGTCATTCCCGTGAGATTTCCACAGATACCCAAATCAATCCCGCCATTCAATCGATCAATCCACCCAATTCCGCCCACTTTCGCTCCAAATTATCAACGCATTCGCGGGTTTTCTATTCCCACAAAAACCTTTTGCACAAAGGCTGTATTATCTGAATCTCCCAATCCCAAACGCTACCCAAAAATGGGTTCAGATTCTGTTGGCCCAATTCCGCCTTCTCAGCTCATCCAAGTGGTCGAACATGCTGCCAACACCGGTGCTCAGGTTGTGATGGAAGCTGTTAATAAGCCTCGGAATGTTACCTATAAAGGGCTCACCGACTTGGTGACTGACACAGATAAAATGAGTGAGGCTGCTATCCTAGAAGTTGTAAGAAAAAACTTTGGAGATCACCTCATTCTTGGGGAGGAGGGAGGGCTCATCGGAGATACTTCTTCTGATTATCTCTGGTGTATCGATCCTTTAGATGGAACAACAAATTTTGCACACTGCTATCCTAGCTTTGCAGTTTCTGTGGGAGTTCTGTTTCGAGGCAAACCAGCTGCTGCTGCTGTGGTGGAGTTTGTTGGGGGCCCCATGTGTTGGAATACCCGTATATTTTCTGCAACCACTGGTGGGGGAGCATTTTGTAACGGGCAAAAGATTCATGCAAGCCAAACAGATCTGGTAGAGCAATCTCTTCTAGTGACTGGGTTTGGTTATGAGCATGATGACGCATGGGCTACCAACATAGATTTGTTTAAAGAGTTTACTGATGTCAGCAGGGGTGTGCGCAGGCTTGGTGCTGCTGCAGTGGACATGTGCCATGTTGCTCTTGGGATTGTAGAAGCGTATTGGGAATACCGTCTAAAACCATGGGATATGGCTGCTGGCGTTTTGATAGTTGAAGAGGCTGGTGGGACAGTTACCTGCATGGATGGTGGCAAATTTTGTGTATTTGACAGATCTGTTTTGGTATCCAATGGTGTGTTGCACTCAAAGCTTTTGGAGAGAATTGGTCCTGCGACAGAAAAACTGAAGAAGAAAGGGATTGATTTCTCATTGTGGTACAAGCCAGAAAATTACAACACAGACTTTTGA 1107 46.07 MGRSLLSSTVIPVRFPQIPKSIPPFNRSIHPIPPTFAPNYQRIRGFSIPTKTFCTKAVLSESPNPKRYPKMGSDSVGPIPPSQLIQVVEHAANTGAQVVMEAVNKPRNVTYKGLTDLVTDTDKMSEAAILEVVRKNFGDHLILGEEGGLIGDTSSDYLWCIDPLDGTTNFAHCYPSFAVSVGVLFRGKPAAAAVVEFVGGPMCWNTRIFSATTGGGAFCNGQKIHASQTDLVEQSLLVTGFGYEHDDAWATNIDLFKEFTDVSRGVRRLGAAAVDMCHVALGIVEAYWEYRLKPWDMAAGVLIVEEAGGTVTCMDGGKFCVFDRSVLVSNGVLHSKLLERIGPATEKLKKKGIDFSLWYKPENYNTDF* 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1572792 1582311 - Vvi1g159 Vvi1g159 769359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g159 368 CDD IMPase 84 330 IPR033942 GO:0008934|GO:0046855
Vvi1g159 368 ProSitePatterns Inositol monophosphatase family signature 2. 295 309 IPR020550 GO:0046854
Vvi1g159 368 PANTHER PHOSPHATASE IMPL1, CHLOROPLASTIC 1 366 - -
Vvi1g159 368 SUPERFAMILY Carbohydrate phosphatase 82 343 - -
Vvi1g159 368 Gene3D - 82 224 - -
Vvi1g159 368 Pfam Inositol monophosphatase family 83 340 IPR000760 GO:0046855
Vvi1g159 368 ProSitePatterns Inositol monophosphatase family signature 1. 159 172 IPR020583 -
Vvi1g159 368 Gene3D - 225 349 - -
Vvi1g159 368 PRINTS Inositol monophosphatase superfamily signature 116 136 IPR000760 GO:0046855
Vvi1g159 368 PRINTS Inositol monophosphatase superfamily signature 138 154 IPR000760 GO:0046855
Vvi1g159 368 PRINTS Inositol monophosphatase superfamily signature 159 175 IPR000760 GO:0046855
Vvi1g159 368 PRINTS Inositol monophosphatase superfamily signature 214 237 IPR000760 GO:0046855
Vvi1g159 368 PRINTS Inositol monophosphatase superfamily signature 261 282 IPR000760 GO:0046855
Vvi1g159 368 PRINTS Inositol monophosphatase superfamily signature 292 316 IPR000760 GO:0046855
Vvi1g159 368 PANTHER INOSITOL MONOPHOSPHATASE 1 366 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g159 K01092 - vvi:100249170 744.577