Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g201 ATGTCTCGCCAAGTGGCCACGTCGCATTTCCACAAATCGAAGACTCTCGACAACAAATATATGCTTGGAGATGAGATCGGAAAAGGAGCATATGGTCGAGTTTACAAGGGTTTGGATTTGGAGAATGGAGACTTTGTTGCAATTAAACAAGTTTCTTTGGAGAATATTGCTCAAGAAGATCTCAACATTATCATGCAAGAGATTGATCTGCTCAAGAATTTGAACCACAAAAACATTGTGAAATATCTTGGATCTTTGAAGACAAGGAGTCATCTGCACATAATTCTTGAGTATGTGGAGAATGGCTCACTTGCAAACATCATCAAACCAAATAAATTTGGGCCATTTCCAGAATCACTGGTGGCTGTTTATATCTCTCAGGTCTTGGAGGGCTTGGTTTATCTACATGAACAAGGTGTCATCCATCGGGATATCAAGGGCGCAAATATATTGACAACCAAAGAGGGTCTTGTGAAACTTGCTGACTTTGGTGTTGCAACAAAATTAACTGAGGCAGATGTTAATACGCATTCCGTTGTTGGGACACCATATTGGATGGCCCCTGAGGTAATCGAAATGTCTGGGGTTTGTGCTGCTTCGGACATTTGGAGTGTTGGTTGCACTGTGATTGAGCTTCTTACATGTGTACCTCCTTACTATGATCTCCAGCCTATGCCAGCTCTATTCCGTATTGTTCAGGATGATCATCCTCCAATACCAGATGGCTTATCTACTGACATTACAGATTTTCTGCGGCAGTGTTTTAAGAAGGATGCTAGGCAGAGGCCTGATGCAAAGACACTGCTTTCACATCCTTGGATACGGAACTGTAGGCGTGCTTTGCAGTCCTCTCTTCGTCATAGTGGAACATTGAGAAATATACAGGAAGATGCTTCAGTTGATGCAGAGATTTCCAATGGAGATGATCAAAGTATTGGTGAAAGCCCTTCTGATGAGAAAGCAGAAGTAATTGCCTCTGAATTTGAAAATGATTCCAGAAAAGAGTGTTTACCAACTGAGGTTGTTGATACCGGCAAATCTTATACGGATTCCAATGGAGATCTTATTGAGGATGAAGTTGATAATCCAGAAGAGTATGTTCAATCAGATCAAGTACCCACATTGGCCATTCACGAAAAATCATCTCTACCAACTACTTCTGGTATATTGCCTGCTAATAAGGATGTGGCTCCCCCTAGTCCAACAGATTCTAACGAGGTACTAGATATGGGTGATCAGGATGAAGCACTAATGAATGGTAAGGTGGGATCTCCTAAGTCAAGAAAGAACAATGTTTTATATAAAAAGAGTGAAGGGAAAGGAAGTTCTACTCAACTTGACAACAGATTATTTGGTTTTGTACCAAGAAGTCAGGAGAATAGTTCTCGAAAGGCTGCAAAGGCACCAGTCATTTCGGGCGGAAATGAGCTAAGTAAATTTAGTGACACGCCAGGAGATGCTTCTTTGGAAGATTTATTTCATCCACTGCATAAGAATCCTGAGGATCAGGCAGCTGAAGCTTCAACATCTGCATCCTCATCACATGTTGTACAAGGCAATGCATTCATAAATGATGCTGGAAAAAATGACCTGGCAACAAAGTTGAGGGCTACAATTGCTCAGAAACAAATGGAGAATGAGATTGGGCAAACAAATGGAGATCTCTTCAGTTTAATGTTGGATGTTCTGAAGGAGGACGTGATGGATATTGATGGTTTGGTTTTTGATGACAAAATGCCTGGAGAGAACCTTTTTCCCCTACAGGCTGTTGAGTTTAGCAGATTAGTTGGGTCATTAAGACCACAGGAACCAGAAGATGTGATCGTGTCTGCCTGTTTGAAGCTTATATCCATTTTTCACCAACGCCCTGAGCAGAAAGGTGTGTTTGTTACTCAGCATGGTTTACTCCCCCTCATGGAACTACTTGAAGTTTCTAGAACTCGTGTTATATGTTCAGTGCTTCAAATTGTAAATCAGATAATCAAGGATAATACCGATTTCCAGGAAAATGCTTGTCTTGTTGGCCTGATCCCTGTTGTTATGAGCTTTGCAGTACCTGATCATCCCCGGGAAGTTCGCATGGAAGCCGCTTATTTCTCGCAGCAGCTTTGTCAGTCTAGCTCCTTGACATTGCAAATGTTCATTGCTTGTGGTGGAATACCTGTTTTAGTGGGCTTTCTGGAGGCTGATTATGTGAGGTACAGGGAAATGGTTCATCTAGCTATTGATGGCATGTGGCAGGTCTTCAAGCTTCAGCGATCAACACCTAGAAATGATTTCTGTCGCATTGCTGCAAAGAATGGAATACTTCCTAGGCTTATAAACACTCTTTATAGTTTGAATGAGGCTGCTCGTCTAGCTTCCATAGCTGGTGGTAGTGGATTTACAATAGAAGGTTTGGCTCCGCGACCACGTTCTGGTTCACTGGATCCCAGCTCTCCTATTTTTATTCAGGGTGAGATATCACTTACTGGAATCGATCATCCTGATCTCCTTAAGGTTAGGCATGGGCTAATTGATCATTCCTTGTCAACTGCAACCCAAGAACCTTCACGTGTTTCAGCATCACATCCCCAAAGGTCAGATGCTAACCAACCAGATTCCCGATACTTCTCTCTGGATACTGACAGGCCTGCAATGGAAGCTTCACGAGAAAACTTGGACCGCTGGAAAATTGATCCACAACGAGTCCCTAATTCGGCTAATAGGACATCAGTAGACAGACCTTCAAAATTGGTGGAAGGTGTGTCAAATGGGTTTCCTAGTACAATAGGGACCCAGCAAGAGCAAGTTCGACCTCTTCTTAGCTTGTTGGATAAGGAGCCCCCTTCCCGGCATTTTTCTGGTCAGCTAGAGTATGTACGGCACCTCTCTGGGTTGGAGAGACATGAAAGCATACTGCCTCTACTACATGCAACCAATGAGAAGAAAACAAATGGTGAACTAGATTTTCTGATGGCAGAATTTGCAGAGGTTTCTGGTCGTGGAAGAGAAAATGGAAATCTGGATTCTGCACCTAGAATTTCAAATAAAACTGTAAATAAGAAGATTCCATTGGCATCTAATGAGGGTGCTGCTTCTACATCTGGGATTGCTTCTCAGACAGCATCAGGTGTACTGTCTGGTTCTGGTGTTTTAAATGCTAGGCCAGGAAGTGCAACGTCATCTGGGTTGCTTTCCCATATGGTATCATCACTCAATGCTGATGTTGCTAAGGAATATCTAGAAAAGGTTGCAGACCTTCTGCTGGAGTTTGCCCAAGCAGATACGACAGTAAAATCCTACATGTGTAGCCAAAGCTTGCTTAGCCGTCTTTTTCAGATGTTCAATCGGATAGAGCCGCCTATTCTTTTGAAGATACTAAAGTGTATCAATCATTTGTCAACCGACCCAAATTGCTTAGAAAATCTTCAGCGTGCCGATGCAATCAAATACTTGATCCCAAACCTTGAACTCAAAGAAGGGCCTCTTGTATTTCAAATACATTATGAGGTCCTCTATGCATTATTCAACCTCTGCAAGATAAATAAGAGGAGGCAAGAACAAGCAGCTGAAAATGGAATCATTCCACACTTGATGCATTTTATAATGTCAGATTCTCCCTTGAAACAACATGCATTGCCTCTACTGTGCGATATGGCCCATGCATCACGTAACTCAAGGGAGCAATTAAGGGCCCATGATGGGTTGGATGTGTACTTAAGCCTACTTGAGGATGAGCTTTGGTCTGTGACAGCATTAGATTCTATTGCTGTGTGCTTGGCCCATGACAATGACAACCGGAAAGTAGAACAGGCGTTGCTGAAAAAGGATGCAATTCAGAAATTGGTCAAATTCTTCCAGTGCTGTCCTGAACAACATTTTGTGCACATATTGGAGCCCTTCTTGAAGATTATCACGAAATCATCCCGGATAAATACAACACTAGCTATTAATGGGTTGACACCCTTGCTTATTGCAAGGCTTGACCATCAGGATGCTATAGCTCGTCTTAATCTGCTCAAACTAATAAAGTCTGTTTATGAGCACCATCCACGGCCAAAGCAACTGATCGTGGAGAATGATCTGCCTCAGAAGCTTCAGAATCTGATTGAGGAGCGCAGAGATGGGCAACGTTCTGGAGGCCAAGTGTTGGTTAAACAGATGGCTACTTCTCTCCTTAAAGCACTCCATATCAACACCGTTTTGTAA 4191 42.62 MSRQVATSHFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTRSHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDDHPPIPDGLSTDITDFLRQCFKKDARQRPDAKTLLSHPWIRNCRRALQSSLRHSGTLRNIQEDASVDAEISNGDDQSIGESPSDEKAEVIASEFENDSRKECLPTEVVDTGKSYTDSNGDLIEDEVDNPEEYVQSDQVPTLAIHEKSSLPTTSGILPANKDVAPPSPTDSNEVLDMGDQDEALMNGKVGSPKSRKNNVLYKKSEGKGSSTQLDNRLFGFVPRSQENSSRKAAKAPVISGGNELSKFSDTPGDASLEDLFHPLHKNPEDQAAEASTSASSSHVVQGNAFINDAGKNDLATKLRATIAQKQMENEIGQTNGDLFSLMLDVLKEDVMDIDGLVFDDKMPGENLFPLQAVEFSRLVGSLRPQEPEDVIVSACLKLISIFHQRPEQKGVFVTQHGLLPLMELLEVSRTRVICSVLQIVNQIIKDNTDFQENACLVGLIPVVMSFAVPDHPREVRMEAAYFSQQLCQSSSLTLQMFIACGGIPVLVGFLEADYVRYREMVHLAIDGMWQVFKLQRSTPRNDFCRIAAKNGILPRLINTLYSLNEAARLASIAGGSGFTIEGLAPRPRSGSLDPSSPIFIQGEISLTGIDHPDLLKVRHGLIDHSLSTATQEPSRVSASHPQRSDANQPDSRYFSLDTDRPAMEASRENLDRWKIDPQRVPNSANRTSVDRPSKLVEGVSNGFPSTIGTQQEQVRPLLSLLDKEPPSRHFSGQLEYVRHLSGLERHESILPLLHATNEKKTNGELDFLMAEFAEVSGRGRENGNLDSAPRISNKTVNKKIPLASNEGAASTSGIASQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAKEYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRIEPPILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGPLVFQIHYEVLYALFNLCKINKRRQEQAAENGIIPHLMHFIMSDSPLKQHALPLLCDMAHASRNSREQLRAHDGLDVYLSLLEDELWSVTALDSIAVCLAHDNDNRKVEQALLKKDAIQKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAINGLTPLLIARLDHQDAIARLNLLKLIKSVYEHHPRPKQLIVENDLPQKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL* 1397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2006895 2039042 - Vvi1g201 Vvi1g201 769401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g201 1396 PANTHER MAP KINASE KINASE KINASE 1205 1351 - -
Vvi1g201 1396 PANTHER MAP KINASE KINASE KINASE 2 836 - -
Vvi1g201 1396 SUPERFAMILY ARM repeat 593 787 IPR016024 -
Vvi1g201 1396 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g201 1396 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Vvi1g201 1396 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Vvi1g201 1396 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Vvi1g201 1396 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Vvi1g201 1396 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Vvi1g201 1396 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Vvi1g201 1396 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g201 1396 MobiDBLite consensus disorder prediction 436 465 - -
Vvi1g201 1396 MobiDBLite consensus disorder prediction 296 318 - -
Vvi1g201 1396 Gene3D Transferase(Phosphotransferase) domain 1 17 311 - -
Vvi1g201 1396 Gene3D - 1046 1393 IPR011989 -
Vvi1g201 1396 CDD STKc_Cdc7_like 19 274 - -
Vvi1g201 1396 Gene3D - 584 792 IPR011989 -
Vvi1g201 1396 MobiDBLite consensus disorder prediction 845 876 - -
Vvi1g201 1396 MobiDBLite consensus disorder prediction 845 871 - -
Vvi1g201 1396 SMART arm_5 707 750 IPR000225 GO:0005515
Vvi1g201 1396 SMART arm_5 622 662 IPR000225 GO:0005515
Vvi1g201 1396 SMART arm_5 1176 1215 IPR000225 GO:0005515
Vvi1g201 1396 SMART arm_5 1130 1174 IPR000225 GO:0005515
Vvi1g201 1396 MobiDBLite consensus disorder prediction 384 493 - -
Vvi1g201 1396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Vvi1g201 1396 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1205 1351 - -
Vvi1g201 1396 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 836 - -
Vvi1g201 1396 SUPERFAMILY ARM repeat 1057 1370 IPR016024 -
Vvi1g201 1396 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi1g201 1396 MobiDBLite consensus disorder prediction 895 924 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
76495 PF00069 Pkinase 1.70E-71 CL0016 Vvi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g201 - - vvi:100254261 2731.05