Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g219 | ATGGCTGGCGGCCGGAGGGCGAAGCTGCATTTGAGCAAGATCTACACATACGCATGTGGGAAAACATCTTTGAAGGGTGATCATGAGCAGATTGGGCAACCCGGTTTTTCCAGGGTAGTTTTCTGCAACGAACCAGATCATTTTGAGGCCAAAATACGTAACTATGCAAACAATTATGTTAGGACTACAAAGTATACGCTAGCAAGTTTCTTGCCTAAATCCTTGTTTGAGCAGTTTAGGAGGGTTGCCAACTTTTTCTTCCTTGTAACCGGCATCTTGTCCTTCACTGATCTCGCCCCTTACTCTGCTGTCAGTGCCGTCCTCCCTCTAGTTATTGTGATTGCAGCCACCATGGTGAAAGAGGGTGTAGAGGATTGGCAGCGAAAACAACAGGATATTGAGGTGAACAATAGGAAAGTTAAAGTGCATGTTGGTGATGGAACTTTTCATGATACTGAATGGAGAAATCTTAGGGTTGGAGATACGAATTTGAAAATGAAACAAGCTTTGGAGGCAACTTCATCCTTAAATGAAGATTCTAACTTCCAGAATTTTAAGGCTGTCATTAAATGTGAAGACCCGAATGCCAATTTAGACTCAAAACTCCGGAATACTGATTACATATATGGGGCTGTCATCTTCACTGGTCATGATACAAAGGTCATTCAAAATTCAACTGATGCTCCCTCAAAGAGAAGCAGAAATGGGAGGATGACAAGGTGGTATCTTAGACCAGACGATACCACTATTTACTTTGACCCCAAAAGAGCACCGGTTGCAGCAATTCTTCACTTCCTGACAGCTGTGATGTTGTATGCATACATGATCCCAATTTCATTGTATACTGATAAACCAGCACATGCCCGTACATCAAATTTGAACGAGGAACTTGGCCAAGTCGACACAATACTTTCTGATAAGACAGGGACTTTGACATGCAACTCAATGGAGTTCATCAAGTGTTCTGTGGCTGGAACAGCTTATGGCCGTGGTGTTACAGAGGTGGAGAGGGCTATGGCAAAAAGAAAAGACGTCATCCAGGGCTTTCTTCGTTTGTTGGCAATCTGTCATACTGCTATACCTGAAGTGAATGAAGTAACCGGGCAGGTTTCATATGAAGCCGAGTCACCAGATGAGGCAGCTTTTGTGATTGCAGCAAGAGAACTTGGTTTTGAGTTCTACAAAAGGACACAAACAAGCATCTCACTCCATGAGTTGGATCCTGTGTCTGGCAAGAAAGTTGAAAGGGTGTACGATCTCCTGAATGTTTTGGAGTTTAACAGCACAAGGAAGCGGATGTCCGTGATTGTGAGAAATGAGGAGGGGAAATTATTATTACTTTGTAAAGGTGCTGATAGTGTCATGTTTGAGAGGCTTGACAAGAATGGTCGGCAGTTTGAAGAGGACACAAGAAACCATGTAAATGAGTATGCTGATGCAGGCTTGAGGACTTTAATACTCGCTTATCGTGAACTTGATGAGGAAGAATATAAAGAGTTCAATAAGAAATTCAATGAGGCCAAGAGCTCGGTTAATGCAGACAGAGAAGCATTGATTGATGAAGTGACAGAGAAAATGGAGAAGAATTTGATTCTCCTAGGCGCAACTGCTGTTGAGGACAAACTTCAACATGGGGTTCCTGACTGCATTGATAAGCTTGCCCAGGCAGGGATAAAGATATGGGTTTTGACAGGAGATAAGATGGAGACTGCCATCAATATTGGTTTTGCTTGTAGTTTGCTTCGACAAGGAATGAAGCAGATAATAATCAGTTTGGAGACACCTGACATTAAAGCTTTGGAAAAAGTGGGAGACAAGGCTGTTATCATAAAGGCATCAAAAGAAAGTGTCGTCCACCAGATAGCAGCAGGGAAAGCCCAGGTTACTGCATCTAGTGGAAGCTCTGAGGCATATGCTTTGATCATTGATGGGAAATCACTGGCATATGCACTACAAGATGATGTCAAAAACTTGTTCCTTGAGCTTGCAATTGGGTGTGCTTCCGTTATTTGCTGTCGTTCATCACCAAAACAGAAGGCGCTGGTTACACGTCTGGTTAAACTTGGAACTGGGAAGACAACACTAGCAATTGGTGATGGCGCCAATGATGTGGGAATGCTTCAAGAAGCCGACATTGGGATTGGAATCAGTGGTGTTGAAGGGATGCAGGCAGTCATGTCAAGTGATATTGCGATTGCTCAGTTCCAGTATTTGGAGCGTTTGCTACTAGTCCACGGACATTGGTGTTATAGAAGGATCTCATTAATGATATGCTACTTCTTCTACAAGAACATCACATTTGCTTTTACTCTCTTCTTATATGAGGCACATGCGTCATTCTCTGGGCAACCTGCATACAATGATTGGTTTATGACGTTTTATAATGTGTTCTTCACATCACTTCCACCAATTGCTTTGGGTGTTTTTGACCAAGATGTCTCAGCACGGTTTTGTCTCAAGTTTCCTCTACTGTACCAAGAAGGAGTGCAGAATGTTCTTTTCAACTGGCGTCGAATACTCAGCTGGATGTTCAATGGGGTATACAGTGCCATCATAATCTTCTTCTTCTGCATAAAGGCACTGGACTCCGAGGCCTTCAATAGCGGGGGGAAAACTATGGCCCTTACTATAAGTTACTTCACCTTGATACAACATATCTTCATCTGGGGAAGTATTGCTCTCTGGTATCTTTTCCTCCTAGTATTTGGAATCATGTCTCCCTCCATTTCTTCCACGGCTTACAAACTTTTTATTGAAGCCCTTGCCCCAGCCCCCACCTTTTGGATTGTCACTCTCTTCGTGAGGTCCTTGCGGCCACAGACTGTTGGTGTATCAGCACGTAGAGTGGCTAGAACTCATAGATAA | 2865 | 43.25 | MAGGRRAKLHLSKIYTYACGKTSLKGDHEQIGQPGFSRVVFCNEPDHFEAKIRNYANNYVRTTKYTLASFLPKSLFEQFRRVANFFFLVTGILSFTDLAPYSAVSAVLPLVIVIAATMVKEGVEDWQRKQQDIEVNNRKVKVHVGDGTFHDTEWRNLRVGDTNLKMKQALEATSSLNEDSNFQNFKAVIKCEDPNANLDSKLRNTDYIYGAVIFTGHDTKVIQNSTDAPSKRSRNGRMTRWYLRPDDTTIYFDPKRAPVAAILHFLTAVMLYAYMIPISLYTDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSVAGTAYGRGVTEVERAMAKRKDVIQGFLRLLAICHTAIPEVNEVTGQVSYEAESPDEAAFVIAARELGFEFYKRTQTSISLHELDPVSGKKVERVYDLLNVLEFNSTRKRMSVIVRNEEGKLLLLCKGADSVMFERLDKNGRQFEEDTRNHVNEYADAGLRTLILAYRELDEEEYKEFNKKFNEAKSSVNADREALIDEVTEKMEKNLILLGATAVEDKLQHGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIISLETPDIKALEKVGDKAVIIKASKESVVHQIAAGKAQVTASSGSSEAYALIIDGKSLAYALQDDVKNLFLELAIGCASVICCRSSPKQKALVTRLVKLGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFQYLERLLLVHGHWCYRRISLMICYFFYKNITFAFTLFLYEAHASFSGQPAYNDWFMTFYNVFFTSLPPIALGVFDQDVSARFCLKFPLLYQEGVQNVLFNWRRILSWMFNGVYSAIIIFFFCIKALDSEAFNSGGKTMALTISYFTLIQHIFIWGSIALWYLFLLVFGIMSPSISSTAYKLFIEALAPAPTFWIVTLFVRSLRPQTVGVSARRVARTHR* | 955 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2253558 | 2261347 | - | Vvi1g219 | Vvi1g219 | 769419 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g219 | 954 | Gene3D | - | 534 | 737 | IPR023214 | - | |
Vvi1g219 | 954 | Gene3D | - | 373 | 533 | IPR023299 | GO:0000166 | |
Vvi1g219 | 954 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 663 | 776 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Vvi1g219 | 954 | PRINTS | P-type cation-transporting ATPase superfamily signature | 304 | 318 | - | - | |
Vvi1g219 | 954 | PRINTS | P-type cation-transporting ATPase superfamily signature | 697 | 716 | - | - | |
Vvi1g219 | 954 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 725 | 872 | IPR032630 | - | |
Vvi1g219 | 954 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 49 | 934 | IPR023298 | - | |
Vvi1g219 | 954 | SUPERFAMILY | HAD-like | 299 | 752 | IPR036412 | - | |
Vvi1g219 | 954 | SFLD | C1.7: P-type atpase like | 286 | 748 | - | - | |
Vvi1g219 | 954 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 306 | 312 | IPR018303 | - | |
Vvi1g219 | 954 | Pfam | Cation transport ATPase (P-type) | 367 | 459 | - | - | |
Vvi1g219 | 954 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 341 | 934 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Vvi1g219 | 954 | Pfam | Phospholipid-translocating ATPase N-terminal | 40 | 106 | IPR032631 | - | |
Vvi1g219 | 954 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 310 | 546 | IPR023299 | GO:0000166 | |
Vvi1g219 | 954 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED | 160 | 234 | - | - | |
Vvi1g219 | 954 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED | 235 | 934 | - | - | |
Vvi1g219 | 954 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED | 2 | 161 | - | - | |
Vvi1g219 | 954 | SFLD | p-type atpase | 286 | 748 | IPR044492 | - | |
Vvi1g219 | 954 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 160 | 234 | - | - | |
Vvi1g219 | 954 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 235 | 934 | - | - | |
Vvi1g219 | 954 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 2 | 161 | - | - | |
Vvi1g219 | 954 | CDD | P-type_ATPase_APLT_Dnf-like | 57 | 857 | - | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1g219 | K01530 | - | vvi:100256123 | 1766.9 |