Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g22 ATGGCTCATTCCTGTGTTCACAAAGATAGAGGGGAGTTGAGGATTTATGAAAATTTGAATGAGCTCAGCACCGATTTAGCCGACTATATCGCTGAATTATCAGAGGTCTCGGTGAAAGAGCGAGGTGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGACTTGATGGGAAAACTGTATGAAGCTCCTTACAACAAGACTGTTGACTGGGCTAAATGGTATATATTTTGGGCGGATGAGCGTGTGGTGGCAAAGAACCATTCTGATAGCAATTATAAGTTAGCAAAAGATGGCCTATTGTCCAAGGTGCCTGTTGTTCCCAGCCATGTACATTCTATCAATGATACGGTGACAGCAGAGGAAGCTGCTGATGAGTATGGGTTTGCCATACGACAGCTAGTGAAGACCCGCGTCATCAGCGTATCTGATACCAGTGATTGCCCCAAGTTTGATCTCATCCTTCTTGGAATGGGCTCTGATGGACATGTTGCCTCGCTGTTCCCTAATCATTCTGTGCTCGAGGAGAAGGATGAATGGGTAACTTTTATAACTGATTCTCCCAAGCCTCCACCGGAGAGGATTACTTTCACACTGCCCGTCATCAACTCAGCGTCCAATGTGGCTGTGGTCATCACAGGTGGCAACAAAGCAGAGGCCGTACACTTGGCAATTGATGATGTGGGACCTGACTGCCCATCACTGCCTGCGCGGATGGTCCAGCCAACTAAGGGGAAGTTGGTGTGGTTTATTGACAAGCCGGCTGCCCTGAAACTTGATTGCTGTCAATTCTCTGAATAG 801 47.19 MAHSCVHKDRGELRIYENLNELSTDLADYIAELSEVSVKERGVFAIALSGGSLIDLMGKLYEAPYNKTVDWAKWYIFWADERVVAKNHSDSNYKLAKDGLLSKVPVVPSHVHSINDTVTAEEAADEYGFAIRQLVKTRVISVSDTSDCPKFDLILLGMGSDGHVASLFPNHSVLEEKDEWVTFITDSPKPPPERITFTLPVINSASNVAVVITGGNKAEAVHLAIDDVGPDCPSLPARMVQPTKGKLVWFIDKPAALKLDCCQFSE* 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 312338 317465 - Vvi1g22 Vvi1g22 769222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g22 266 SUPERFAMILY NagB/RpiA/CoA transferase-like 13 261 IPR037171 -
Vvi1g22 266 Gene3D - 9 261 - -
Vvi1g22 266 CDD 6PGL 21 251 IPR005900 GO:0005975|GO:0006098|GO:0017057
Vvi1g22 266 PANTHER 6-PHOSPHOGLUCONOLACTONASE 1 266 IPR039104 -
Vvi1g22 266 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 20 249 IPR006148 GO:0005975
Vvi1g22 266 PANTHER 6-PHOSPHOGLUCONOLACTONASE-RELATED 1 266 - -
Vvi1g22 266 TIGRFAM pgl: 6-phosphogluconolactonase 15 258 IPR005900 GO:0005975|GO:0006098|GO:0017057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g22 K01057 - vvi:100245849 531.176