Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g224 ATGAATCCTCCGATGCTTCCCATCACCAATCCTTCTGCTTCTTCAGCAATGGTGGCGACCACATCTTTGACTGCAAATGCGGCCACAATGTTGATTCAGGAGCATCATGATGAGACTGCTCGCCTTCTCATTGATGGTAGGGCCGTCGATACGAAGCCTTTTCTCCCTAGGGCTTCCAGCTACACCAGTACTGGTACGCCCGTTAATGGCAGCAGCTTCTATCAGCAGCGGCGGAGGCGGATTGCCAGCGACACCTCTCTGGCATCTCTCACCACGGGCGGTGGCAGCCGGAGCGAGTACGTGGCCCACGCTGCGTCCGAGACATATTTGCTGACTCGCCTTGGTTTCAAGCTGTTGCGGTATCTTGGGGTAGGCTACAGATGGATTACAAGATTTCTTGCACTTGGTTGTTATGCCTTACTACTTATGCCAGGTTTTATTCAAGTTGGATATTACTATTTCTTCTCCAGTAGGGTCCGCAGAGGTATTGTTTATGGAGATCAACCAAGAAATAGGCTTGATCTGTATTTACCCAAAAACAGTGATGGGCCAAAGCCAGTTGTTGCATTTGTAACTGGTGGAGCCTGGATTATTGGTTATAAAGCATGGGGTTCTCTTTTAGGGCAACAGTTATCAGAAAGAGACATCATAGTGGCATGCATAGATTACAGAAATTTCCCCCAGGGAACCATAAGTGATATGGTGAATGATGCTTCTCTAGGTGTCTCATTTGTGTGCAACAATATTGCTGAATATGGGGGTGATCCTAATAGGATTTATTTAATGGGACAGTCAGCTGGTGCACATATTGCTGCTTGCACTCTCTTGGAGCAGGCAATCAAGGAATGTGGTGAAGGAGGGAGCACTTCTTGGAGTGTCGCCCAGATAAAGGCTTATTTTGGTTTATCTGGAGGGTACAATTTATTTAACCTGATAGATCATTTCCATAGTCGAGGCTTATACCGTTCTATCTTTTTAAGCATAATGGAAGGGGAACAATCTTTACATCAATATTCTCCTGAAGTAACGGTGCAGGATCCGAACATTAAAACTGCAGTTTCTCGCCTACCTCCTATCATCCTTTTTCATGGTACTGCAGATTATTCCATTCCAGCAGATGCCAGCAAGTCTTTTGCAGAGACTCTTCAGAGAGTTGGAGTTAAAGCTGAATCAATAATGTACGAAGGAAGAACTCACACAGATGTATTTCTTCACGATCCAATGAGGGGTGGTAGAGATGATATGTTTGAAGATTTAGTTGCCATGATTCATGCAAATGATCCAGAAGCCCTAGCAAAAGATGCAGTGGCACCTCCAAGAAAACGCCTTGTACCTGAATTCATGTTGAAGTTGGCTCGTGCTGTCAGCCCATTCTAA 1377 45.32 MNPPMLPITNPSASSAMVATTSLTANAATMLIQEHHDETARLLIDGRAVDTKPFLPRASSYTSTGTPVNGSSFYQQRRRRIASDTSLASLTTGGGSRSEYVAHAASETYLLTRLGFKLLRYLGVGYRWITRFLALGCYALLLMPGFIQVGYYYFFSSRVRRGIVYGDQPRNRLDLYLPKNSDGPKPVVAFVTGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTISDMVNDASLGVSFVCNNIAEYGGDPNRIYLMGQSAGAHIAACTLLEQAIKECGEGGSTSWSVAQIKAYFGLSGGYNLFNLIDHFHSRGLYRSIFLSIMEGEQSLHQYSPEVTVQDPNIKTAVSRLPPIILFHGTADYSIPADASKSFAETLQRVGVKAESIMYEGRTHTDVFLHDPMRGGRDDMFEDLVAMIHANDPEALAKDAVAPPRKRLVPEFMLKLARAVSPF* 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2301128 2308453 + Vvi1g224 Vvi1g224 769424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g224 458 PANTHER ISOPRENYLCYSTEINE ALPHA-CARBONYL METHYLESTERASE ICMEL1-RELATED 92 448 - -
Vvi1g224 458 Gene3D alpha/beta hydrolase 155 408 IPR029058 -
Vvi1g224 458 Pfam BD-FAE 173 382 - -
Vvi1g224 458 PANTHER ARYLACETAMIDE DEACETYLASE 92 448 - -
Vvi1g224 458 SUPERFAMILY alpha/beta-Hydrolases 150 426 IPR029058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g224 K15889 - vvi:100249158 920.998