Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g23 ATGGCTGTTCTCAAGTGTAATGATCATTTTGTGCGCCACTTACAAGTGGAACTCCTGGGCCTCCTCTTCTATTTTGGAATAGAGTCTCCAGGTTATCATTACCATGAGAGGTGTGGGGTCTTTGTCCAGCAAATGCTCACATTGTATCAGAGTAATTTTATTTACCTCAATCATGTGAGACGTTACTACGTAGTGAGGACTGAGGACCTATTGGACCCGAGTAGACAAAATATTCTATTTTCCGCCCATAGTCTGACTGAATATATATTCTCCATGTTAAAACCGTTTTCGAGAATGGTTTCCATCGTAAGGCGCGCTATGAACAACACTGATACAAACTTGGTGCTCTTCCGCATCCTTGCTTCAATCCATGCCATCTCCATTGTCATCGCTGTCACAGCTTCATCATCACCCTACACTCCCGTGGAGAACATAGCTCTAGATTGTGGAAGCCATGGCCACAGCACCGCCCCTGATGGCCGCAAATGGACTAGTGACACCGGTTCAAAATTCATATGCTCCCAACTCAATGCATCTTCCATCTCCATGGCCTCCACCCAAGACTCCGTTCCACTGGTTCCTTACATGACTGCTCGTATCTTCACCTCCCAATTCACTTACGCCTTCCCGCTATCCCCGGGCCCCAAGTTCCTTCGCCTTCACTTCCATCCGGCCTCCTACTCCAATCTCGATCCCTCCCACGCCTTCTTCTCCGTCACGGCAAACCACTACACGCTGCTTCACAACTTCAGCGCTTGGCTCACTGCTGGCTTTCTTAATCAAACCCATTTCAGTAAGGAGTATTGTGTTTGGGTGAGCTCGGAGCAGCTGCTGAATCTCACTTTCGCTCCAGTTGCAGGTGCTTTTGCCTTTGTGAATGGCATCGAGGTTGTTTCCATGCCCACGGATCTTTACCTCAAAGGTGAAGATATCTCCATGGCTGGGCAATCGCAGCCATTCACGATCAACAATGGCACTGCACTCGAGATGGTTTATAGATTAAACGTGGACGGGCAAGCCATTTCGGCCGTCGACGACACCGGCATGTTCCGAGAATGGTCTCAGGACGACTCCTTTATCTTCGGACCCGCAGCTGGGCAAGATCCATTTCATCTCACAATTAAGATCAAATTCACCAAGGTTCCACCCTATACTGCGCCTGAGATTCTCTACAGGACTGCTCGCTCCATGGGGATGAACAGGAATGTCAACGAGAACTACAATCTGACGTGGATATTCCCCGTGGATTCAGGGTTTTACTATCTGGTGAGGCTCCATTTCTGCGAGATTGCGCCGGAGATAACTGGGATCAATCAGAGGGTGTTTGAGATATTTTTGAATAACCAGACGGCCGACGATCAGATGGATATTATGGTTTATGCCGATGGTATCGGAGTACCGATTTTCAGGGAATTCGTGGTGATAGTGCCGGAAGCAGGGGGAATATTCAAATTGAACGCAAGCGACGGAAACCTCGCCGGACCCAATCCTATCCCTAAACATAAGTCTAAAGCCGAAGTGGATCAAATTGAACCCATTCAAACGGCGGATCGTTGGAATAAGGTCCGAAAACCATTGATTTTCGCCGGAGCAAGGACTGCAGGCACGAGCCGAGGAACATCCTGGCATTTTTCGCTGGAGGAGATGCTTTCAGCGACGAACGACTTCAGCGACGATTTCCTCATCGGCGTCGGCGGCTTCGGAAACGTCTACAGGGGCGCCATCCACGGCGGAGCAACCCCAGTCGCGGTGAAACGATTGAACCCCACAGACGTGAAGACCGCCAACATACTGCTTGATGAGAACTGGGTGGCGAAGGTCTCTGATTTCGGATTATCAAAGTTGGGACCCGCCGGCGGGTCCGAGAGCCACGTTCTGTGCGGCAGACCGCCGGTGGAAAAGCACCTAGAGGGGAGAGAGGCGAGCTTGGTGGAGTGGGGAAAGGCCCACTACAAGAGCGGGAGGCTTGAGGAGATCGTGGACAATCGGGTGAGGAATGAGATTGGGGCGGAGTGTCTAAGGAAGTTTGGGGAGATAGCGACAAGCTGCGTGGGGGATCGGGGGACGGAGCGGCCGGCGATGGGTGATGTGATGTGGGGGCTTGAATTCGCGATGCAGTTGCAGAAGAAGAGCGGGGAGGTAAGTGAGATAGAAGAAGGATTGGAGGGTGAAAGGAGGTGGAATGGGCATGGTGGGGGTGGGGGTGGGGGTGGAGGTGGTGGAGGTGAATCCACATTGGGGATGTCCGGAGATGTCTTCTCTGAGATCAGAAATCCCCAAGGCCGATAA 2289 51.55 MAVLKCNDHFVRHLQVELLGLLFYFGIESPGYHYHERCGVFVQQMLTLYQSNFIYLNHVRRYYVVRTEDLLDPSRQNILFSAHSLTEYIFSMLKPFSRMVSIVRRAMNNTDTNLVLFRILASIHAISIVIAVTASSSPYTPVENIALDCGSHGHSTAPDGRKWTSDTGSKFICSQLNASSISMASTQDSVPLVPYMTARIFTSQFTYAFPLSPGPKFLRLHFHPASYSNLDPSHAFFSVTANHYTLLHNFSAWLTAGFLNQTHFSKEYCVWVSSEQLLNLTFAPVAGAFAFVNGIEVVSMPTDLYLKGEDISMAGQSQPFTINNGTALEMVYRLNVDGQAISAVDDTGMFREWSQDDSFIFGPAAGQDPFHLTIKIKFTKVPPYTAPEILYRTARSMGMNRNVNENYNLTWIFPVDSGFYYLVRLHFCEIAPEITGINQRVFEIFLNNQTADDQMDIMVYADGIGVPIFREFVVIVPEAGGIFKLNASDGNLAGPNPIPKHKSKAEVDQIEPIQTADRWNKVRKPLIFAGARTAGTSRGTSWHFSLEEMLSATNDFSDDFLIGVGGFGNVYRGAIHGGATPVAVKRLNPTDVKTANILLDENWVAKVSDFGLSKLGPAGGSESHVLCGRPPVEKHLEGREASLVEWGKAHYKSGRLEEIVDNRVRNEIGAECLRKFGEIATSCVGDRGTERPAMGDVMWGLEFAMQLQKKSGEVSEIEEGLEGERRWNGHGGGGGGGGGGGGESTLGMSGDVFSEIRNPQGR* 763
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 334517 337539 - Vvi1g23 Vvi1g23 769223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g23 762 Pfam Malectin-like domain 147 489 IPR024788 -
Vvi1g23 762 Gene3D Transferase(Phosphotransferase) domain 1 623 718 - -
Vvi1g23 762 Gene3D Phosphorylase Kinase; domain 1 542 608 - -
Vvi1g23 762 PANTHER GPCR KINASE, MITOGEN-ACTIVATED PROTEIN (MAP) KINASE KINASE KINASE 7-RELATED 541 589 - -
Vvi1g23 762 PANTHER GPCR KINASE, MITOGEN-ACTIVATED PROTEIN (MAP) KINASE KINASE KINASE 7-RELATED 591 625 - -
Vvi1g23 762 PANTHER GPCR KINASE, MITOGEN-ACTIVATED PROTEIN (MAP) KINASE KINASE KINASE 7-RELATED 134 481 - -
Vvi1g23 762 PANTHER GPCR KINASE, MITOGEN-ACTIVATED PROTEIN (MAP) KINASE KINASE KINASE 7-RELATED 625 714 - -
Vvi1g23 762 ProSitePatterns Peroxidases active site signature. 214 225 IPR019794 GO:0004601
Vvi1g23 762 PANTHER OS07G0166700 PROTEIN 134 481 IPR045272 GO:0004714|GO:0006468
Vvi1g23 762 PANTHER OS07G0166700 PROTEIN 591 625 IPR045272 GO:0004714|GO:0006468
Vvi1g23 762 PANTHER OS07G0166700 PROTEIN 625 714 IPR045272 GO:0004714|GO:0006468
Vvi1g23 762 PANTHER OS07G0166700 PROTEIN 541 589 IPR045272 GO:0004714|GO:0006468
Vvi1g23 762 Gene3D - 326 513 - -
Vvi1g23 762 Gene3D - 144 302 - -
Vvi1g23 762 SUPERFAMILY Protein kinase-like (PK-like) 542 699 IPR011009 -
Vvi1g23 762 MobiDBLite consensus disorder prediction 723 762 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g23 Vvi14g1013 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g23 - - vvi:100242441 1050.43