Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g24 ATGAGTAGCAGAATCCCCACTTCACTGCTACACACCATTCCCAGGTCCCTCTTCTCCTCTTCTATTTCTTCCAATAATCTCTCTTTCAGAACCCTCTCCACACTCCCCTCCTCCCCCCAAAACCCTTTTTCTTCATCTTCCTTCTCTCCTCCTATTTCTCATTTTGTTGGCTTTCCATTCAAACCCGCATCCTCACTTTCTTCTTCTCCAACTCTTAGATTCCTAAACACCAACTCCTCTGATCATATTGACAGCAAAGAAGATCACCCACATCAGTATGAAACAAGTGAAGGAGAGACCACTGATGGATGGGAGGAAGAGGAAGAGGAAGAGGTTGAGCCTGAGATAGGTGATGGAGGGGATGGTGGTGGCATTGTGCTGCAAAATGTTCCCTGGGGCGAACGGGTTCTATCTATTGCTCGTGAGGTTCTCTTACAATTTGGTGGTGATATGGAACTCTTCTCTTTCAAGACAACTCCACGAGGGTACATATATGTGAGACTAGACAAACTATCAAACAAATATGGGTGTCCAAGCATGGAGGAGATTGAAAGGTACAACCTAGAGTACAAGAAAAAACTAGATGAAATGGGAGCACTTGGAGAGATACCTCACAATTTGGCTATTGAGGTATCATCGCCAGGTGCAGAACGGTTGCTAAAGGTGCCAGATGATCTGGATCGATTCAAAGACATGCCTATGAGAGTAAGCTATGTAGAAGATGTAGAAACTCAATGCCTCGAAAAGGATGGTGTTTTCATGCTGGAGTCCATCAAAACAGAATCAGCAAATTGTGTGTGGAAGTTGGCAAATGTGAGGGAAAATAGGGACCCTTTGGGCAAAGGTAGACCTTTGAGCCGTAAACAGAAGGATTGGAGATTGAATCTGCCATTTGAAATGTTTAGGAGGGTAACTCTGTATCTTGAATACTGA 933 44.16 MSSRIPTSLLHTIPRSLFSSSISSNNLSFRTLSTLPSSPQNPFSSSSFSPPISHFVGFPFKPASSLSSSPTLRFLNTNSSDHIDSKEDHPHQYETSEGETTDGWEEEEEEEVEPEIGDGGDGGGIVLQNVPWGERVLSIAREVLLQFGGDMELFSFKTTPRGYIYVRLDKLSNKYGCPSMEEIERYNLEYKKKLDEMGALGEIPHNLAIEVSSPGAERLLKVPDDLDRFKDMPMRVSYVEDVETQCLEKDGVFMLESIKTESANCVWKLANVRENRDPLGKGRPLSRKQKDWRLNLPFEMFRRVTLYLEY* 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 339374 341595 - Vvi1g24 Vvi1g24 769224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g24 310 Hamap Ribosome maturation factor RimP [rimP]. 134 310 IPR003728 GO:0042274
Vvi1g24 310 MobiDBLite consensus disorder prediction 80 98 - -
Vvi1g24 310 PANTHER OSJNBA0006B20.18 PROTEIN 11 310 - -
Vvi1g24 310 MobiDBLite consensus disorder prediction 99 117 - -
Vvi1g24 310 MobiDBLite consensus disorder prediction 77 123 - -
Vvi1g24 310 PANTHER OS01G0594650 PROTEIN 11 310 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g24 - - vvi:100259261 531.176