Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g249 ATGGCAACAGCCTCCTCTGCTTCACTGCCACTGCCTCTGCTTTTGTTTGCCAGAGTCTCAGCTCTTTTTGTTGCCCTCCTTGTTCTGTTTTGGGCTCTTGCTTTTAAGTCTAGCTTCATCTCTCATCACTCATCCCAGGAAGATATAGTCTATGCTGTTCTTCATCCTCTATTTATGGTGATCGGTTTCATCCTCATCAGTGGAGAAGCTATTCTTGTTCATAGATGGTTGCCTGGTTCAAGAAATTTGAAGAAATCAGTGCATCTATCCATGCAAGGTCTGGCTTTGGCTTCTGGGGTTTTTGGGATTTGGACAAATTTCCATGGGCAAGATGGGATTGTGGCTAATTTCTGGAGCTTGCATTCATGGATGGGTCTGATCTGTATGCTCTTGTTTGGTGCTCAGTGGTTGATAGGTTTCCTGAGCTTTTGGCACAGAGGGGAGATGCGCACAACCCGGGTAAGCGTCTTGCCTTGGCATGTCTTCCTTGGTCTATACACCTATGGCCTGGCGGTGGCCACAGCTGAAACAGGACTTTTGGAGAAGTTAACGTTCCTTCAAACAAACAGAAATGTGTCGAAACATTGTACAGAGTCGATGGTTGTAAATGGCGTGGGAGTGGGACTGGCCCTGCTCAGCGGAATTGTGATACTGGCTGCTGTTTGCCCCAAGTACCAAACTCTACCAAGTAAACTCATGTATTCAGACACCAAGTGCTTGTCTTCTTAA 729 46.5 MATASSASLPLPLLLFARVSALFVALLVLFWALAFKSSFISHHSSQEDIVYAVLHPLFMVIGFILISGEAILVHRWLPGSRNLKKSVHLSMQGLALASGVFGIWTNFHGQDGIVANFWSLHSWMGLICMLLFGAQWLIGFLSFWHRGEMRTTRVSVLPWHVFLGLYTYGLAVATAETGLLEKLTFLQTNRNVSKHCTESMVVNGVGVGLALLSGIVILAAVCPKYQTLPSKLMYSDTKCLSS* 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2525939 2527795 + Vvi1g249 Vvi1g249 769449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g249 242 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED 2 242 - -
Vvi1g249 242 SMART 561_7 54 179 IPR006593 -
Vvi1g249 242 Gene3D - 5 228 - -
Vvi1g249 242 ProSiteProfiles Cytochrome b561 domain profile. 16 221 IPR006593 -
Vvi1g249 242 Pfam Eukaryotic cytochrome b561 54 185 IPR006593 -
Vvi1g249 242 PANTHER CYTOCHROME B561-RELATED 2 242 IPR043205 GO:0016491
Vvi1g249 242 CDD Cyt_b561_ACYB-1_like 54 187 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g249 Vvi14g922 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g249 K08360 - vvi:100264480 432.18