Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g262 ATGGATGAGGAAGAGATGGAGAGAAGGGAGGCAGCCACAGATGAAGGAACAGACACTGCCATAGAAGCAGATGAAAACAAGTTGAAAGAGCGAAAGGTCTCATGGGCAAAGCTCCGCCGTGTAGACTCTCTCAATTTGGAGGCTGGACGAGTTTCTACTGCCGGAGGCCACACCTCCAAGGTAGATTGGAGGAGAACGTTGAATTTAGCATTTCAGAGCATAGGGGTGGTATATGGAGATATAGGGACCTCTCCGCTCTATGTGTTTTCCAGCACTTTCACCGATCATAAGATTGAGAACACAGACGACATTCTTGGGGTGTTGTCACTCGTCATCTATACCATAGTCCTTGTGCCTCTGCTGAAGTATGTTCTTATCGTGCTGCGAGCCAACGACAACGGGGATGGTGGAACATTTGCACTCTATTCCTTGATATGTCGTTACGCAAGGGTGAGCTTAATTCCAAATGATCAACCAGAGGACAGACAACTATCCAACTACAAATTGGATACTCCATCCAACCAGTTGAGACGTGCCCAAAAGATTAAAGAGAAGCTTGAGAATAGTAGAACTTCCAAGGTTGTGCTTTTCATTGTTACCATCTTAGGAACTTCCATGGTGATTGGAGACGGGGTTCTGACTCCATGCATCTCAGTCCTTTCTGCTGTGAGTGGGATAAGTTCACTAGGCAAAGATGCTATAGTGGGGATTTCAGTAGCGATCCTGATCTTGCTCTTCTCTGCTCAACGTTTTGGCACTGATAAAGTGGGCATCGCCTTTGCCCCTGTCATTCTGTTGTGGTTTACCTTCATAAGTGGTATCGGTCTCTACAACCTATTCAAATATAACGTGGGAGTACTGCGTGCATTCAATCCCAAATATGCCGTAGATTACTTCAAAAGAAATGGTAAGAAAGGGTGGATATCACTTGGTGGGGTTGTTCTATGCATTACAGGAACTGAAGCAATGTTTGCTGACCTGGGTCACTTCAACATTCGAGCTATCCAAATTAGTTTCTCTGGCATTGTGTTCCCCGCATTACTGGCTGCATATAGTGGGCAAGCTGCATACCTCACTAAATTCCCTGGTGAGGTGGAACATACTTTCTATAGCTCGATTCCAGATCCTTTGTATTGGCCAACGTTTGTCGTGGCCGTTGCTGCTGCCATTATTGCTAGCCAAGCTATGATATCAGGAGCATTTGCAATTATCTCGCAGTCCCTAAGTCTGTGTTGCTTTCCAAGGGTTAAGGTTGTCCATACTTCTGCTAAGTATGAGGGTCAGGTTTACATACCTGAGGTCAACTATTTGCTTATGGTCGCTTGTGTTATAGTCTGTGTTGGATTCAAGACCACAGAAAAGATAGGCAATGCATACGGAATTGCTGTGGTTGCTGTTATGGTGATTACTACATGTATGGTTACCCTTATAATGCTTGTTATATGGAAGACAAGTATATGGTGGATCGCTCTATTCTTAGTGGTGTTCAGTTCCATAGAAGTGGTATATCTATCATCTGTCCTCTATAAATTCAAACAAGGTGGTTTCCTTCCACTTGCCTTCTCCTTTGTCCTAATGGCAGTAATGGGAATATGGCATTATGTGCACAAAGAAAGATACATGTTCGAGCTTAGGAACAAGGTTTCTAGCGATTACATAAAAGACCTGGCTGCGAACCCTCGTATAAACCGTGTTCCTGGAATAGGGCTATTGTACTCAGAGCTTGTCCAGGGCATTCCCCCAATATTCCCCCACTTCATTGCCAATGTTCCTTCCATCCATTCAGTACTAGTGTTTGTCTCCATTAAGAACATTCCAATTAGTAAAGTGGCATTGGAGGAGCGGTTTTTGTTTCGACATGTAGAGCCAAGAGACTACAGAATGTTCCGCTGCGTGGTAAGATACGGATATAAAGATGTAATCGAGGGATCAAAGGAGTTTGAGCGGCAGTTAGTAGAAAACTTGAAGGAATTCATCCGCCATGAGGGCTACATTTCTGAAGCAAGAGCCGAAGTACTACAGCAGAACCCACCTCGTATGCAAATTGTGCAGACAGCGCAGGAGAAAGGTGTGGTTTACCTCCTCGGAGAAGCAGAAGTGGTTGCAGAAGAGAAATCTTCCTTGTTCAAGCAGATAGTTGTCAACTATGCCTATAGTTTCCTGAGGAAGAACTGCAGGCAAGGAGAGAAAGTGCTGGAAATTCCAAGAACTAGGCTTCTCAGGGTTGGAATGACATATGAGATATGA 2247 44.46 MDEEEMERREAATDEGTDTAIEADENKLKERKVSWAKLRRVDSLNLEAGRVSTAGGHTSKVDWRRTLNLAFQSIGVVYGDIGTSPLYVFSSTFTDHKIENTDDILGVLSLVIYTIVLVPLLKYVLIVLRANDNGDGGTFALYSLICRYARVSLIPNDQPEDRQLSNYKLDTPSNQLRRAQKIKEKLENSRTSKVVLFIVTILGTSMVIGDGVLTPCISVLSAVSGISSLGKDAIVGISVAILILLFSAQRFGTDKVGIAFAPVILLWFTFISGIGLYNLFKYNVGVLRAFNPKYAVDYFKRNGKKGWISLGGVVLCITGTEAMFADLGHFNIRAIQISFSGIVFPALLAAYSGQAAYLTKFPGEVEHTFYSSIPDPLYWPTFVVAVAAAIIASQAMISGAFAIISQSLSLCCFPRVKVVHTSAKYEGQVYIPEVNYLLMVACVIVCVGFKTTEKIGNAYGIAVVAVMVITTCMVTLIMLVIWKTSIWWIALFLVVFSSIEVVYLSSVLYKFKQGGFLPLAFSFVLMAVMGIWHYVHKERYMFELRNKVSSDYIKDLAANPRINRVPGIGLLYSELVQGIPPIFPHFIANVPSIHSVLVFVSIKNIPISKVALEERFLFRHVEPRDYRMFRCVVRYGYKDVIEGSKEFERQLVENLKEFIRHEGYISEARAEVLQQNPPRMQIVQTAQEKGVVYLLGEAEVVAEEKSSLFKQIVVNYAYSFLRKNCRQGEKVLEIPRTRLLRVGMTYEI* 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2699661 2703084 - Vvi1g262 Vvi1g262 769462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g262 748 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 679 747 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g262 748 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 27 674 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g262 748 PANTHER POTASSIUM TRANSPORTER 5 27 674 - -
Vvi1g262 748 PANTHER POTASSIUM TRANSPORTER 5 679 747 - -
Vvi1g262 748 MobiDBLite consensus disorder prediction 1 23 - -
Vvi1g262 748 Pfam K+ potassium transporter 70 639 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vvi1g262 748 TIGRFAM kup: potassium uptake protein 69 748 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g262 K03549 - vvi:100250816 1417.91