Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g27 ATGTCGTCGGAATACCAGCTTTTGTTTGTACCTGATATCGGTAGGTGGTCTGTTGTGAGTGTTGAGGTAGTTGTGGGTGTTGTGTTGCTCTGTGTTGTTTTTGGCTTCTGGCTCGCTCCGGGTGGGCTGGCATGGGCTCTGGCCAAGTGCAGGGGGCGTTTCGCGATTCCGGGTCCTCCTGGTTTGCCCGTCACCGGGTTGCTTCACGTTTTCTCTGGGTCTGAGGCTCATCGTGTTCTTGCGAAGCTTGCCCGGAGATGGGACGCAGTCGGTTTGATGGCTTTCTCAGTGGGGTTGACTCGGTTTGTGGTATCGAGTGATCCGGAGACAGCCAAGGGGATTCTGAGCAGCTCGGCTTTCGCTGACCGGCCGGTGAAGGAGTCGGCGTATGAGCTTCTGTTCCACAGGGCGATGGGGTTTGCGCCCTACGGGGAATACTGGAGAAACCTGAGGAGAATATCGGCCACCCATTTGTTCAGTCCGAAGAGAATCGCTGCCTTCGAGGGTTTCAGAAGGGACATATGTCTCAAAATGGTGGATGAGATAAGGGGTTTGATGGTTGAGAATGGTGAAGTTGAGGTCAAGAAGGTTCTCCATTTTGGATCTTTGAATAATGTGATGATGACGGTGTTTGGAAGGAGCTATGATTTTGATGAAGGAGGAGTTGGGTTTGAGCTTGAAAAGCTGGTGCGTGAAGGGTATGAGCTTCTGGGTACTTTCAACTGGAGCGACCACTTTCCCCTTCTGGGTTTGTTGGATTTGCAGGGAGTGAGGAAGAGATGCAGACGTTTGGCCTCAAAGGTGAATGTGTTTGTTGGAAAGATCATAGAAGAACACAGAGCGAAAAGGGTGGGTGGACTTTCTGTAAATGGAGTTGAGGACTTTGTCGATGTTTTGCTTGATTTGGAGAAAGAAGACAAACTCACTGACTCTGACATGATTGCTGTTCTCTGGGAAATGATTTTCCGAGGAACTGACACAGTAGCAATCCTGCTGGAATGGATCCTTGCCAGAATGGTTCTCCACCCAGAAATCCAATCCAAAGCCCAATCCGAAATCGACGCCATGGTGGGAAACTCCAGACCCGTTTCGGATTCCGACATCCCCAACCTACCCTACGTCCAGTCCATTGTGAAAGAGTCTCTCAGGGTGCACCCACCAGGACCTCTACTCTCCTGGGCACGCCTCGCAACCGACGACGTCCACATCGGAGATACCCTAGTTCCGGCAGGGACAACAGCCATGGTGAACATGTGGGCCATCACCCACGACGAGAAGGTGTGGCCAGAGCCTCTTGAGCTGGCTCCATTCGGGTCTGGCAGGAGGGTCTGTCCAGGGAAATCCATGGGGTTGGCCACAGTTCACCTCTGGTTGGCTCAGCTGCTCCAAAGCTTCAAATGGGTTCCTTCCCATCATAGCGTGGACTTGTCCGAGACACTCAATCTCTCCCTTGAAATGAAGAACCCACTCATCTGCAAGGCAGTGGCTAGGGTTGCTTGA 1500 52.2 MSSEYQLLFVPDIGRWSVVSVEVVVGVVLLCVVFGFWLAPGGLAWALAKCRGRFAIPGPPGLPVTGLLHVFSGSEAHRVLAKLARRWDAVGLMAFSVGLTRFVVSSDPETAKGILSSSAFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFSPKRIAAFEGFRRDICLKMVDEIRGLMVENGEVEVKKVLHFGSLNNVMMTVFGRSYDFDEGGVGFELEKLVREGYELLGTFNWSDHFPLLGLLDLQGVRKRCRRLASKVNVFVGKIIEEHRAKRVGGLSVNGVEDFVDVLLDLEKEDKLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPEIQSKAQSEIDAMVGNSRPVSDSDIPNLPYVQSIVKESLRVHPPGPLLSWARLATDDVHIGDTLVPAGTTAMVNMWAITHDEKVWPEPLELAPFGSGRRVCPGKSMGLATVHLWLAQLLQSFKWVPSHHSVDLSETLNLSLEMKNPLICKAVARVA* 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 381266 382921 - Vvi1g27 Vvi1g27 769227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g27 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Vvi1g27 499 Gene3D Cytochrome P450 49 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 497 - -
Vvi1g27 499 Pfam Cytochrome P450 57 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 SUPERFAMILY Cytochrome P450 56 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PANTHER CYTOCHROME P450 78A7-RELATED 1 497 - -
Vvi1g27 499 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g27 499 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g27 Vvi17g450 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g27 K20619 - vvi:100249034 936.021