Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g28 ATGGGTCGAGGAGTCAGCAGTGGTGGAGGACAGAGTTCATTGGGCTACCTTTTTGGGAGTGGAGAGGCTCCCAAACCGGCGCCAAACAATGCCCCAGCTTCTTCTAGCGAAGGACCAGCTGCTAATACTGGGGCTTCCACCAAGCCCATTGCTGCAGCTCAACCAACAGATGTTACTAAGCAGATACCTGCAGGTATCAATAGTAACACTGCAAACAACTACCACCGGGCGGATGGCCAGAACTGTGGCAACTTCATCACAGGTCGTCCCTCAACTAAGGTCCACTCTGCACCTGGTGGTGGATCATCTTTGGATTACCTCTTTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGCTAGTGGTGGTGGTGCTAGTGGTGGTGGTGGTAAATGA 396 54.04 MGRGVSSGGGQSSLGYLFGSGEAPKPAPNNAPASSSEGPAANTGASTKPIAAAQPTDVTKQIPAGINSNTANNYHRADGQNCGNFITGRPSTKVHSAPGGGSSLDYLFGGGGGGGGGGGASGGGASGGGGK* 132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 390749 395260 - Vvi1g28 Vvi1g28 769228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g28 131 MobiDBLite consensus disorder prediction 109 131 - -
Vvi1g28 131 MobiDBLite consensus disorder prediction 1 75 - -
Vvi1g28 131 PANTHER PROTEIN SPIRAL1-LIKE 2 1 112 - -
Vvi1g28 131 PANTHER SPR1 1 112 IPR039613 GO:0043622
Vvi1g28 131 MobiDBLite consensus disorder prediction 29 75 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g28 Vvi17g455 ECH
Vvi1g28 Vvi14g1022 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g28 K18635 - vvi:100257592 181.03