Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g29 ATGGGAAACGCATTCGCCTGCCTGTCATCTCATCAGAAAGCGGTTTCAAAGAAGCGCTCCAAGCGAGCACCAAGGCCTGCTGGACCACTCCCCACCTCCCTCAGCCAAAGAAGGAATGCAACAGTGTCACCTTCGCCGTCGAGGAGGAAGAACGATAACAGACTGGACGACGACGCTTTGATTCGACAGCAAGCGGTGGCTGCAGCTATCCTCTTTCGCCAACACCAGAGGAGCAATTCCATGACATTTGACCGATCAAACTCGGTCGTATATCCAATTCCAGCCCCATCTTGGAACAAACACAGCAACTTGCCCCGCAGTGCAAGTACTAGAACTGGGTCTTTCTCAGACTCCCCTCTTAAACCCCATCAGCTCCTCACAAAGGATCTGAAGTTAGATGAGTTGGAGACCAAACATTTTGTCCTTGTCCATGGAGGTGGTTTTGGAGCTTGGTGTTGGTACAAAACCATAGCACTTCTAGAAGAAGCTGGATTTGAAGTTGATACAGTAGACTTAATGGGCTCTGGAATTCACTCATCTGATACCAACAGCATCACCAGCCTAGCACTATACGTAAAGCCCCTCACTGATTTCCTTGGAAAACTTGCAGATGGAAAGGTGATTTTAGTGGGGCATGACTTTGGTGGTGCTTGCATCTCATACGCCATGGAGCTGTTTCCTTCTAAAGTTGCGAAGGCTATTTTCATTGCTGCAGCAATGCTGACTAATGGACAGAGCACCCTTGATATGTTTACCCAACAGACCGGCATGAACGATCTGATGCGCAAAGCTCAAATATTTCTTTATGCCAATGGGAAGGATCAACCCCCGACTGCCATTGACCTAGACAAAACATTGTTGAAAGACTTGCTGTTCAATCAATGTACTGCTAAGGATGTTGCATTGGCATCAGTATCAATGAGGCCAACCCCCATTGCACCTGTTTGGGAGAAGCTGTCTCTTTCTGATGCCAAGTACGGCTCTGTCCAGAGATTTTATATAAAAACTCAAGAAGATTGCGCCTTACCCAGTCTTCTGCAAGAGATCATAATAAGCTCGAATCCCCCAGAACAGGTTTTCCAGCTTAAAGGCTCTGATCATTCGCCCTTCTTCTCGAAGCCTCAGTCCCTTCACAGGCTCTTAGTGGAGATATCAAAGATTCCACCAAAGCGAAAACTTAAGGTAAGTACCAACTTTTTTCAAGAAACAAATATGGACATGTTGCAGAAAATGCATTGTAGACCTCGTAATTCGAAGTAA 1260 46.35 MGNAFACLSSHQKAVSKKRSKRAPRPAGPLPTSLSQRRNATVSPSPSRRKNDNRLDDDALIRQQAVAAAILFRQHQRSNSMTFDRSNSVVYPIPAPSWNKHSNLPRSASTRTGSFSDSPLKPHQLLTKDLKLDELETKHFVLVHGGGFGAWCWYKTIALLEEAGFEVDTVDLMGSGIHSSDTNSITSLALYVKPLTDFLGKLADGKVILVGHDFGGACISYAMELFPSKVAKAIFIAAAMLTNGQSTLDMFTQQTGMNDLMRKAQIFLYANGKDQPPTAIDLDKTLLKDLLFNQCTAKDVALASVSMRPTPIAPVWEKLSLSDAKYGSVQRFYIKTQEDCALPSLLQEIIISSNPPEQVFQLKGSDHSPFFSKPQSLHRLLVEISKIPPKRKLKVSTNFFQETNMDMLQKMHCRPRNSK* 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 397350 400531 + Vvi1g29 Vvi1g29 769229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g29 419 SUPERFAMILY alpha/beta-Hydrolases 138 383 IPR029058 -
Vvi1g29 419 Gene3D alpha/beta hydrolase 132 386 IPR029058 -
Vvi1g29 419 MobiDBLite consensus disorder prediction 32 48 - -
Vvi1g29 419 Pfam Alpha/beta hydrolase family 140 375 IPR000073 -
Vvi1g29 419 MobiDBLite consensus disorder prediction 1 55 - -
Vvi1g29 419 PANTHER METHYLESTERASE 15, CHLOROPLASTIC-RELATED 45 389 - -
Vvi1g29 419 PANTHER METHYLESTERASE FAMILY MEMBER 45 389 IPR045889 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g29 - - vvi:100262720 766.918