Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g30 ATGTGCGGAATCGGTGTGATCATCTCCGGCGTTCGCATCGGTTCATCATCTCCAATTTCCCATTCCACCTCTCCGGTCTCGTCGGCGTTTTCAGTGGATGATCTTAAGACGGCTCTTGGGAGGAGGGGTCCGGATAGTCTGGGATGCAAGAAGATTTTTCTTCATCCCACTGTTTCGGGGGAAGAGTGTGTGGAATTGCGATATTGTGGCGATAAATGCGATTGCACGTTCTTTGCAAACGGAGAATTGCACTTCATTGGCGCCACTTTGCAGCTCAGGGGGGTGAATCCTATTACCCAGCCCTTGGTAGATGAATCTGGCAATATTCTTGTTTATAATGGTGAAATATTTGGAGGAATTCATGTTGGCAGTGACAGCAATGATGCTGAAATTCTTATGCAATCTCTAGGAAAGTGCTGCACTTGTGGTTCTCCTGGACACACTACAGCATGCAATTACAGTGGATTAGGCAAAAGTTCCATTCCTGAACTTCTTTCAACCATTAAGGGGCCATGGGCTATAATCTATTGGCAGGATAGTTCAAGAACCATGTGGTTTGGTAGAGATGCATTCGGAAGGCGGAGCCTCCTTGTGCACTGGCCGAATTTGGAGGATTGCCGGTTTTTGCTATCATCTGTATCACCAATTTCTTCTGTTGAGCAGAGTTCTGATTTTGAAGTTGAAAACAGAATTACAAACATCAATTTCTGGGATGAGCTTTCATGTGGGGTGTACAGTGTATCCATTGGTTCGTCAAAAGCAGATAAATGTCTGCTCGGTGAAGTAAAAAAACATGAATGGACAAATCCCATTCTAAAGGAACTAGTTAAGTGGGAGAGAACATATGTTGAACCCAAACCAGCGGAGTTACATTTTATGATTCCCAGCAAACAGCCTGACGTGCATTCAATTTGTTTGGAAAGAAAGCCTTCGGGATTAGGGCCGATGCAAACATCAGTTCCCGTGCCAGCACAGACGGTGCTTATTGCTTTGAGAGAATCTATGATGAGACGCACTACACAAAGTGCAATTTTTCCGGCAGTTACATGTGACCTTCAACAAGAAGAACTAGTTCCTGTGGCCATTCTTTTTTCTGGTGGATTAGATTCAATGATACTTGCAGCATTATTGGATGAGTGCCTACAACCCAGCTATGGAATTGATCTACTTAATGTAAGCTTTGATGGTCAGTCTGCTCCTGATAGAATCTCTGCTAAAGCTGGACTAAAAGAACTACAAAGAATCTCACCGTTAAGAAGGTGGAAACTTGTGGAGGTTGATGCTGATTTGTCGAAGTTGACCCAGGAAACAAAGCATGTCATGTCGCTCATAAATCCTGCAAAAACTTACATGGACTTGAATATTGGAATAGCATTATGGCTTGCAGCTGGTGGTGATGGTTGGGTTCATGAAGAGATTGGGGAGATTGATAATGATAATTACCAGCGTGTTAAGTACAAGTCCAAGGCCAGGATTCTCCTAGTTGGTTCTGGTGCTGATGAGCAATGTGCTGGGTATGGTAGGCATAAGACAAAATATAGAAGTGGAAGTTGGCTTGGGCTAAATGAGGAAATGAAATTGGACATGCAGAGAATTTGGAAAAGGAACCTGGGGAGAGATGATAGATGCATTGCTGATAATGGCAAGGAGGCTAGATTTCCTTTCTTGGATGAGGATGTCATAAGGACACTGCTTGATATTCCCCTGTGGGAGGTTGCCAACCTTGATCAACCAAGTGGAACTGGTGACAAGAAGATCCTGAGAGAGGTTGCACAAATGCTTGGTATATATGAAGCTGCAACTCTGCCTAAAAGAGCAATCCAGTTTGGTTCAAGAATTGCAAGGGAATCAAATAGAAAGAACTTTGGAAGTAATCGTGCAGCAAATCAGGCATCTGCAGGGAGTGTTGTGATTTATGGGACATCCAACTTGACTTAA 1938 43.6 MCGIGVIISGVRIGSSSPISHSTSPVSSAFSVDDLKTALGRRGPDSLGCKKIFLHPTVSGEECVELRYCGDKCDCTFFANGELHFIGATLQLRGVNPITQPLVDESGNILVYNGEIFGGIHVGSDSNDAEILMQSLGKCCTCGSPGHTTACNYSGLGKSSIPELLSTIKGPWAIIYWQDSSRTMWFGRDAFGRRSLLVHWPNLEDCRFLLSSVSPISSVEQSSDFEVENRITNINFWDELSCGVYSVSIGSSKADKCLLGEVKKHEWTNPILKELVKWERTYVEPKPAELHFMIPSKQPDVHSICLERKPSGLGPMQTSVPVPAQTVLIALRESMMRRTTQSAIFPAVTCDLQQEELVPVAILFSGGLDSMILAALLDECLQPSYGIDLLNVSFDGQSAPDRISAKAGLKELQRISPLRRWKLVEVDADLSKLTQETKHVMSLINPAKTYMDLNIGIALWLAAGGDGWVHEEIGEIDNDNYQRVKYKSKARILLVGSGADEQCAGYGRHKTKYRSGSWLGLNEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRTLLDIPLWEVANLDQPSGTGDKKILREVAQMLGIYEAATLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSVVIYGTSNLT* 646
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 400559 418459 - Vvi1g30 Vvi1g30 769230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g30 645 Pfam Glutamine amidotransferase domain 99 211 IPR017932 -
Vvi1g30 645 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 19 233 IPR029055 -
Vvi1g30 645 Gene3D HUPs 330 636 IPR014729 -
Vvi1g30 645 PANTHER ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1 1 630 - -
Vvi1g30 645 CDD Asn_Synthase_B_C 358 610 IPR001962 GO:0004066|GO:0006529
Vvi1g30 645 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 35 209 IPR029055 -
Vvi1g30 645 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 355 630 - -
Vvi1g30 645 CDD Gn_AT_II_novel 1 245 - -
Vvi1g30 645 Pfam Asparagine synthase 355 411 IPR001962 GO:0004066|GO:0006529
Vvi1g30 645 Pfam Asparagine synthase 490 593 IPR001962 GO:0004066|GO:0006529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g30 - - vvi:100266204 1283.86