Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g331 ATGCAGCAACTCTCTTACACACCGATTCACAACTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCACTCTCCCTTCTGCTTGCTCTGATTTTTTTTTCTGCATAACCCATCTCTCTCTCATGGCAGAAATCGACTACCAAGCTAAAGCAACCAGTGCTCCCACAAATGGACGCTTAAAGATCTTTGGCTTTAACGTATCAGAGGACGAAGACGTAGAGTCATCCAAAACTCCATCTGGGTCACCAGAATCAGGGGGTTTTCCAGCAACTGGTGACCGGAAATACGAGTGCCAGTACTGTTGCCGTGAATTTGCCAACTCACAAGCATTAGGTGGTCACCAAAACGCTCACAAGAAAGAGAGACAGCAGCTCAAGCGCGCTCAAATGCAAGCCACCCGAAACGCCGCCACTTCCTACATCCGAAACCCCATGATATCTGCGTTCGCGCCGCCCCCCCATCTCCTGGCTCCGGCGGGGCCTGTGGTGGTTCCGGCGGGGGCGGCGCCGCAGTCGGCTTCCTGGGTGTACGTTCCACGTGGGCCGCCGCCGTTCCACGTGTCTCACGGGTGTGTATTCCCTTCATCTAGTGGGAGAGGTGCCGCTACGCTATCGTATGCCGGCGGTGTCGGGGAGTCAACACTAACGACGTCGGCTCCACAGTCTAGAGCTCATGGAAGAGTGGATGCGCCTTCATTGAGCAGGTTCTCTAGAGGCGACGGTGGCCCCACTTTTGATGATGCATTCGGCTTGGATTTGCATCTTAGCCTCGCCCCAGCTGCGCCTTGA 783 54.92 MQQLSYTPIHNSLSLSLSLSLTLPSACSDFFFCITHLSLMAEIDYQAKATSAPTNGRLKIFGFNVSEDEDVESSKTPSGSPESGGFPATGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAATSYIRNPMISAFAPPPHLLAPAGPVVVPAGAAPQSASWVYVPRGPPPFHVSHGCVFPSSSGRGAATLSYAGGVGESTLTTSAPQSRAHGRVDAPSLSRFSRGDGGPTFDDAFGLDLHLSLAPAAP* 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3422551 3423477 - Vvi1g331 Vvi1g331 769531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g331 260 PANTHER - 40 259 - -
Vvi1g331 260 SUPERFAMILY beta-beta-alpha zinc fingers 89 121 IPR036236 -
Vvi1g331 260 MobiDBLite consensus disorder prediction 211 239 - -
Vvi1g331 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Vvi1g331 260 PANTHER ZINC FINGER PROTEIN 5 40 259 IPR044299 GO:0010090
Vvi1g331 260 Gene3D Classic Zinc Finger 83 143 - -
Vvi1g331 260 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g331 Vvi14g867 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g331 - - vvi:100245810 485.337