Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g331 | ATGCAGCAACTCTCTTACACACCGATTCACAACTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCACTCTCCCTTCTGCTTGCTCTGATTTTTTTTTCTGCATAACCCATCTCTCTCTCATGGCAGAAATCGACTACCAAGCTAAAGCAACCAGTGCTCCCACAAATGGACGCTTAAAGATCTTTGGCTTTAACGTATCAGAGGACGAAGACGTAGAGTCATCCAAAACTCCATCTGGGTCACCAGAATCAGGGGGTTTTCCAGCAACTGGTGACCGGAAATACGAGTGCCAGTACTGTTGCCGTGAATTTGCCAACTCACAAGCATTAGGTGGTCACCAAAACGCTCACAAGAAAGAGAGACAGCAGCTCAAGCGCGCTCAAATGCAAGCCACCCGAAACGCCGCCACTTCCTACATCCGAAACCCCATGATATCTGCGTTCGCGCCGCCCCCCCATCTCCTGGCTCCGGCGGGGCCTGTGGTGGTTCCGGCGGGGGCGGCGCCGCAGTCGGCTTCCTGGGTGTACGTTCCACGTGGGCCGCCGCCGTTCCACGTGTCTCACGGGTGTGTATTCCCTTCATCTAGTGGGAGAGGTGCCGCTACGCTATCGTATGCCGGCGGTGTCGGGGAGTCAACACTAACGACGTCGGCTCCACAGTCTAGAGCTCATGGAAGAGTGGATGCGCCTTCATTGAGCAGGTTCTCTAGAGGCGACGGTGGCCCCACTTTTGATGATGCATTCGGCTTGGATTTGCATCTTAGCCTCGCCCCAGCTGCGCCTTGA | 783 | 54.92 | MQQLSYTPIHNSLSLSLSLSLTLPSACSDFFFCITHLSLMAEIDYQAKATSAPTNGRLKIFGFNVSEDEDVESSKTPSGSPESGGFPATGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQATRNAATSYIRNPMISAFAPPPHLLAPAGPVVVPAGAAPQSASWVYVPRGPPPFHVSHGCVFPSSSGRGAATLSYAGGVGESTLTTSAPQSRAHGRVDAPSLSRFSRGDGGPTFDDAFGLDLHLSLAPAAP* | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3422551 | 3423477 | - | Vvi1g331 | Vvi1g331 | 769531 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g331 | 260 | PANTHER | - | 40 | 259 | - | - | |
Vvi1g331 | 260 | SUPERFAMILY | beta-beta-alpha zinc fingers | 89 | 121 | IPR036236 | - | |
Vvi1g331 | 260 | MobiDBLite | consensus disorder prediction | 211 | 239 | - | - | |
Vvi1g331 | 260 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 94 | 121 | IPR013087 | - | |
Vvi1g331 | 260 | PANTHER | ZINC FINGER PROTEIN 5 | 40 | 259 | IPR044299 | GO:0010090 | |
Vvi1g331 | 260 | Gene3D | Classic Zinc Finger | 83 | 143 | - | - | |
Vvi1g331 | 260 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 96 | 116 | IPR013087 | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1g331 | - | - | vvi:100245810 | 485.337 |