Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g36 ATGAGATATTGTTCTTTGCCTGCTAGAGATCTCCGCCTTTTGGACCCTTTATTCATTTATCCTTCTACAATATTAGGCCGGGAGAAGGCTATTGTGGTCAATCTTGAACAAATTAGGTGTATAATCACAGCTGAAGAGGTTATCCTGATGAATTCCTTGGATGGTTGTGTTGTTCAGTATAAGTCAGAATTGTGCAAACGTCTTCAAAATAATAAAGATCAAGCTGATGACTTGCCTTTTGAATTTCGGGCACTGGAGCTGGCTTTGGAACTAACATGCATGTCTCTTGATGCTCAGGTTAAAGAGCTGGAAATGGAGATATATCCCGTGCTAGATGAACTAGCATCATCCATTAGCACTCTTAATCTAGAACGTGTTCGTAGATTCAAAGGACACCTTCTTGCTCTTACTCAACGAGTTCAAAAGGTTCGTGATGAAATAGAACATCTCATGGATGATGATGGTGACATGGCTGAGATGTACCTGACAGAAAAGAAACAGAGAATGGAGGCTTATCCCTGGAATGACCTACATTCACTGAGTAATGTGTCAGGTGGGACCAGAGTGCTACCAGCATCTGCACCCGTTTCACCGGTGGAGTCGATCAGTGGATCCCAGAGATTGCAAAGGGCTTTTAGCACTATAATGAATTCAAGCAAACATGGAAGCTTTACGGGTTCATCTAATAATGGGGAAAATATCGAACAACTTGAAATGCTACTTGAAGCATATTTTGTTTTCATTGACAATACTCTCAACAAGCTGTTATCGCTCAAGGAATACATTGATGATACTGAAGACTTGATCAACATTAAACTTGGCAATGTTCAGAACCAGCTCATACAATTCGAGTTGCTTCTGACAGCAGCCACCTTCGTGGCCACAATATTTGCTGCAGTGACAGGAGTGTTTGGAATGAACTTCACAGCCACAATTTTTGATTACCCGTCAGCATTTAACTGGGTACTGGTTATCACTGGAGTTATCTGTGGCTTCTTATACTTCTCTTTCTTGTTGTATTTCCGGCACAAGAAAGTTTTTCCATCATAG 1050 41.05 MRYCSLPARDLRLLDPLFIYPSTILGREKAIVVNLEQIRCIITAEEVILMNSLDGCVVQYKSELCKRLQNNKDQADDLPFEFRALELALELTCMSLDAQVKELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMYLTEKKQRMEAYPWNDLHSLSNVSGGTRVLPASAPVSPVESISGSQRLQRAFSTIMNSSKHGSFTGSSNNGENIEQLEMLLEAYFVFIDNTLNKLLSLKEYIDDTEDLINIKLGNVQNQLIQFELLLTAATFVATIFAAVTGVFGMNFTATIFDYPSAFNWVLVITGVICGFLYFSFLLYFRHKKVFPS* 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 453462 457950 + Vvi1g36 Vvi1g36 769236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g36 349 Gene3D - 1 52 - -
Vvi1g36 349 CDD Mrs2_Mfm1p-like 1 346 IPR039204 -
Vvi1g36 349 Gene3D Magnesium transport protein CorA, transmembrane region 56 280 - -
Vvi1g36 349 Gene3D Magnesium transport protein CorA, transmembrane region 287 345 - -
Vvi1g36 349 PANTHER MAGNESIUM TRANSPORTER MRS2-5 1 348 - -
Vvi1g36 349 Pfam CorA-like Mg2+ transporter protein 239 337 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vvi1g36 349 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 348 IPR039204 -
Vvi1g36 349 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 286 338 IPR045863 -
Vvi1g36 349 Coils Coil 133 153 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g36 K16075 - vvi:100262794 656.751