Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g38 ATGGATCCAACAAGTGGGAGTGTGGATAGGAAAAGAAATGTCTTGTTAAAAAGGAAATTGAAAAAGGTGGTCCTTTTTTATAATAGTGGATTTCATTGCTGTTGTCTTCAACTTCAGTTTTCATTTCCCATTCTCTCAGAAAACATCAACGTCTTCAGTTATTCTACAGATTTTGGTGGGATGAGAGTTTTTGGGGCGAGTCTGTTGGCCATTTTGTGGGCTCTTGCCTGCATTGAAGGGGCAATATCACATGGGGATCAGCCTCTCGCTAAGATTGCTATTCACAATGCAAAATTTGCTCTTCATGATCAAGCTTATGTCAAAGCCTCTCCTACAGTTCTTGGATTGGGGGGACAAAATACAGAATTTGTGACTGTAGAGTTTAGCTCCCCAAGCCCATCAGTTGATGATTGGATTGGGGTATTTTCTCCTGCCAATTTCAGTGCTTCAACCTGTCTTCCAGAAGATATCCGGGTTACTCCTCCACTATTGTGTTCTGCGCCTATTAAGTATCAGTATGCAAATTACACCAGTCCTAACTACAAAAATACAGGGAAAGGATCATTGAAGCTTCAATTGATCAACCAGAGATCAGACTTCTCTTTTGCACTATTTTCTGGCGGATTAGTAAATCCGAAGCTGGTGGCAGTGTCAAATTCTGTAGCTTTTGCAAATCCTAATGCACCAGTTTACCCTCGTCTGGCACAAGGAAAAGTATGGAATGAGATGACTGTAACATGGACGAGTGGATACGGGATCAATGATGCAGCACCTTTCATTGAATGGGGTCTGAAAGGAGGAGACAAGGTGCGTTCCCCAGCTGGGACACTGACTTTTGATCGTAGGAGCATGTGTGGAGCACCAGCAAGCACAGTTGGTTGGCGTGATCCTGGATACATACATACTAGTTTCTTGAAGGAGTTGTGGCCGAACTTAGTGTATAGCTACAAGCTGGGGCATAGATTGTTCAATGGTACATATATTTGGAGTCAACAATACCAGTTTAGGGCTTCTCCTTATCCTGGTCAAAACTCTTTACAACGTGTTGTCATTTTTGGTGACATGGGAAAGGATGAGGCTGATGGTTCTAATGAATACAACCAATATCAGCGTGGCTCTCTTAACACTACTAAGCAGCTTATTGAAGATTTGAAGAACATTGATATTGTCTTCCACATTGGAGATATATGTTATGCAAATGGATACCTTTCACAGTGGGATCAATTTACTGCACAGGTTGAGTCAATTACCTCAACAGTGCCATACATGATTGCAAGTGGCAACCATGAGCGGGACTGGCCTGGAACAGGATCCTTCTATGGAAACCTGGATTCTGGAGGAGAATGTGGTGTGCTGGCTGAGACTATGTTCTATGTGCCTGCTGAGAACAGGGCTAAATTCTGGTACTCCACTGATTTTGGCATGTTCCGGTTCTGCATAGCTGACACAGAACATGATTGGAGAGAGGGAACAGAGCAATACAGGTTCATTGAGCACTGTCTAGCCTCTGTTGATAGACAGAAGCAACCATGGTTGATCTTTCTTGCACATCGTGTTCTTGGTTATTCTTCTTCCTCCTTTTATGCTGAAGAGGGATCCTTTGCTGAACCAATGGGAAGGGACGACCTTCAAAAACTTTGGCAGAAGTACAAGGTTGACATTGCCATGTATGGTCATGTGCACAATTATGAAAGGACTTGTCCCATTTATCAGAATATTTGCACTAATGAAGAGAAGCACTATTACAAGGGCACCTTGAATGGAACAATACATGTGGTTGCTGGTGGGGGAGGAGCAAGCCTTGCAGATTTCACCACCATCAACACCAAGTGGAGCATCTTCAAAGACTATGATTATGGGTTTGTAAAACTTACAGCATTTGATCATTCAAACCTGTTGTTTGAATACAAGAAGAGCAGGGATGGCAAGGTTTATGACTCTTTCAGAATATCCAGGGGTTACAGAGACATCTTGGCCTGCACTGTGGATAGCTGCCCAAGCAGCACCTTGGCATCTTGA 2019 43.14 MDPTSGSVDRKRNVLLKRKLKKVVLFYNSGFHCCCLQLQFSFPILSENINVFSYSTDFGGMRVFGASLLAILWALACIEGAISHGDQPLAKIAIHNAKFALHDQAYVKASPTVLGLGGQNTEFVTVEFSSPSPSVDDWIGVFSPANFSASTCLPEDIRVTPPLLCSAPIKYQYANYTSPNYKNTGKGSLKLQLINQRSDFSFALFSGGLVNPKLVAVSNSVAFANPNAPVYPRLAQGKVWNEMTVTWTSGYGINDAAPFIEWGLKGGDKVRSPAGTLTFDRRSMCGAPASTVGWRDPGYIHTSFLKELWPNLVYSYKLGHRLFNGTYIWSQQYQFRASPYPGQNSLQRVVIFGDMGKDEADGSNEYNQYQRGSLNTTKQLIEDLKNIDIVFHIGDICYANGYLSQWDQFTAQVESITSTVPYMIASGNHERDWPGTGSFYGNLDSGGECGVLAETMFYVPAENRAKFWYSTDFGMFRFCIADTEHDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSSSFYAEEGSFAEPMGRDDLQKLWQKYKVDIAMYGHVHNYERTCPIYQNICTNEEKHYYKGTLNGTIHVVAGGGGASLADFTTINTKWSIFKDYDYGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISRGYRDILACTVDSCPSSTLAS* 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 464305 474910 - Vvi1g38 Vvi1g38 769238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g38 672 PANTHER PURPLE ACID PHOSPHATASE-RELATED 67 671 - -
Vvi1g38 672 Pfam Fn3-like domain from Purple Acid Phosphatase 107 225 IPR040974 -
Vvi1g38 672 CDD MPP_PAPs 347 652 IPR041792 -
Vvi1g38 672 Pfam Calcineurin-like phosphoesterase 348 563 IPR004843 GO:0016787
Vvi1g38 672 Gene3D - 342 655 IPR029052 -
Vvi1g38 672 Pfam Iron/zinc purple acid phosphatase-like protein C 588 647 IPR025733 -
Vvi1g38 672 Pfam Purple acid Phosphatase, N-terminal domain 235 336 IPR015914 GO:0003993|GO:0046872
Vvi1g38 672 Gene3D - 228 341 - -
Vvi1g38 672 SUPERFAMILY Metallo-dependent phosphatases 347 654 IPR029052 -
Vvi1g38 672 PANTHER PURPLE ACID PHOSPHATASE 67 671 - -
Vvi1g38 672 SUPERFAMILY Purple acid phosphatase, N-terminal domain 207 339 IPR008963 GO:0003993|GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g38 K22390 - vvi:100252537 1279.62