Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g41 ATGTCGTACATGAAAGGAGACATGCTCACCAGAACGAGAAAGCTCGTTAAGGGCTTGGCCAAGGCCGAACCTTCCTGGCTGAAAGCCATGGAACGGGTTCCACCTCCAACATTTCCTCGACCTGATGGAAAAGTTAAGAAAATTAGTCTCCCCGAGGATGTTTATATTCGAAAGTTCTTTCTAAAGCATCCAGACTCTAAACATGAAGATGCTATCAAGATGACCGCTTTTAACCCCCCTCCAGCTCGTGTATTTGGTTGTCGGGTGCTTGAGTTGAAGGAAGAGGGAGTCAGTGAGGAGGAGGCCATGGCTGTAGCCGATATGGAATATAGGGCAGAGAAAAAAGCCAAAAGGATGGCATATGCTCGACTGAAGCAAATTACTCGTCTTCAGGGGAAGAAACTTCCCCCTAACCCATATCCTAGTGCCATCAAGGAGATACAGGCTGAAGAGAGGAAATACGTTCGTGACCGTTTCTTCGATCCCAAGATACTCAAAATTGTGGAGAAGATGAAAGAGGAGAAGGCAGCTGTGATGCAGGACAGAATGAGAGGTGGTGGCTGGTAA 567 47.27 MSYMKGDMLTRTRKLVKGLAKAEPSWLKAMERVPPPTFPRPDGKVKKISLPEDVYIRKFFLKHPDSKHEDAIKMTAFNPPPARVFGCRVLELKEEGVSEEEAMAVADMEYRAEKKAKRMAYARLKQITRLQGKKLPPNPYPSAIKEIQAEERKYVRDRFFDPKILKIVEKMKEEKAAVMQDRMRGGGW* 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 496478 498561 + Vvi1g41 Vvi1g41 769241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g41 188 PANTHER EXPRESSED PROTEIN 1 188 - -
Vvi1g41 188 PANTHER EXPRESSED PROTEIN 1 188 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g41 K17402 - vvi:100264579 375.555