Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g43 ATGCTGCTTTCACTCTCCTTCTTGGGCACATGGCCTGCTATTATGACTCTCCTAGAAAGAAGGGGCCGTCTTCCTCAGCATACTTATCTTGATTACACAATCACGAATCTCTTGGCTGCGGTTATTATTGCTTTAACCTTTGGTCAGATTGGCAGTAGCACTGCTGAGGTGCCAAATTTCCTAACTCAACTTTCTCAGGACAATTGGCCCTGCATTTTGTTAGCAATGGCAGGAGGGGTGGTCCTCAGCCTTGGAAACCTGTCCACACAGTATGCGTGGGCTTTTGTTGGTTTATCAGTTACAGAGGTCATCACCTCAAGTATTACTGTTGTTATAGGCACAACCTTGAATTACTTCCTGGATGACAAAATTAATAAAGCCGAGATTCTTTTCCCTGGTGTTGGATGCTTCTTGATTGCTGTTTGCCTTGCCTCTGCTGTTCACTCGTCCAATGCTGCTGATAATAAGGCAAAGCTTATGGCACAGGGTATAGATACTTCTGTGGTTAAGGAAGCATCGCCAAACAACGGGGATCCCGAGAATGGAAGTAGTGGTACTGCACCAAAGGCAAAATTTGGGACTGCTGACTTCCTTATAGAGGTTGAGAAGAGAAGATCAATCAAGGTGTTTGGGAAGAGCACATTGATTGGACTGGTCATAACTTTCTTTGCGGGTGTTTGCTTCTCTCTTTTTTCCCCAGCATTTAACCTTGCAACGAACGATCAATGGCACACTCTGAAAGAAGGAGTTCCTCATTTGGTTGTCTACACTGCATTCTTCTACTTTTCGGTCTCATGTTTCGTGCTTGCCCTCATTCTAAATATCATCTTCCTCTACCGCCCTGTAATGGACGCACCCAAATCAACGCTAAGGGCTTATCTCAGTGACTGGAATGGCAGAGGCTGGGCCTTTTTAGCTGGGCTCCTCTGTGGGTTCGGGAACGGTCTCCAGTTCATGGGAGGCCAAGCTGCAGGATATGCAGCAGCTGATGCAGTTCAGGCACTCCCACTTGTGAGCACTTTCTGGGGAATAGTTCTGTTTGGAGAATACCGAAAATCGTCAAGAAGAACATATATATTGCTTGGGAGCATGCTGTTCATGTTCATTGCTGCTGTGGGAATACTCATGGGATCGTCAGGGCATCGAAAAGATTAA 1155 45.97 MLLSLSFLGTWPAIMTLLERRGRLPQHTYLDYTITNLLAAVIIALTFGQIGSSTAEVPNFLTQLSQDNWPCILLAMAGGVVLSLGNLSTQYAWAFVGLSVTEVITSSITVVIGTTLNYFLDDKINKAEILFPGVGCFLIAVCLASAVHSSNAADNKAKLMAQGIDTSVVKEASPNNGDPENGSSGTAPKAKFGTADFLIEVEKRRSIKVFGKSTLIGLVITFFAGVCFSLFSPAFNLATNDQWHTLKEGVPHLVVYTAFFYFSVSCFVLALILNIIFLYRPVMDAPKSTLRAYLSDWNGRGWAFLAGLLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWGIVLFGEYRKSSRRTYILLGSMLFMFIAAVGILMGSSGHRKD* 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 501309 504875 - Vvi1g43 Vvi1g43 769243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g43 384 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 1 381 IPR030189 GO:0016021|GO:0022857|GO:0071705
Vvi1g43 384 Pfam Ureide permease 28 378 IPR009834 GO:0016021|GO:0071705
Vvi1g43 384 PANTHER BNAC09G21970D PROTEIN 1 381 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g43 - - vvi:100252466 733.021