Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g431 ATGGAGGTGCATAAGGTAGTTCCACCACCCCATAGGAGCACCTTTCAGAAGTTCAAGACCAGGCTCAAGGAAACCTTCTTCCCGGATGACCCTTTGCGCCAATTCAAGGGACAGCCACCCAAGAGGAAGTGGATACTTGGAGCTCAGTATGTTTTTCCTATCCTTCAATGGGGTCCCAACTACAGTCTCAAACTCTTCAAATCTGACATCGTTTCTGGCCTCACCATTGCCAGCTTAGCCATTCCTCAGGGAATCAGCTATGCTAAGCTTGCTAATCTACCTCCCATAGTTGGCCTCTATTCAAGCTTTGTTCCTCCTCTTGTATATGCGGCTCTAGGAAGCTCGAGGGATCTCGCGGTGGGTCCGGTTTCTATTGCTTCTCTGATACTGGGATCAATGCTTAGGCAGGAAGTCTCTCCATCCAAAGACCCAATCTTGTTTCTTCAACTAGCCTTTTCTTCAACCTTTTTTGCTGGTGTTGTTCAAGCTTCCCTTGGAATATTAAGACTTGGATTTATTATTGATTTCCTTTCAAAGGCTACTCTTATTGGATTCATGGCTGGAGCTGCTATTATAGTCTCTCTGCAACAGCTGAAAGCCCTCCTTGGCATTACGCATTTCACCAAACAAATGGGTTTGGTTCCTGTTCTGGGCTCTGTGTTCCACAACACAGCTGAGTGGTCATGGCAAACAATAGTGATGGGGTTCTGCTTCCTATCGCTGCTTCTGCTGGCAAGACACGTTAGCATGAAGAAACCAAATCTGTTCTGGGTCTCAGCCGGAGCTCCTCTTGCTTCTGTCATCATCTCGACCCTATTGGTTTTCGCATTCAAAGCTCAACATCATGGCATCAGCATAATTGGAAAATTACAAGAAGGTTTAAACCCTCCCTCGTGGAACATGTTGCATTTCCATGGAAGCTACCTGGGACTAGTAATGAAAACTGGCCTTGTCACTGGCATTATTTCCCTTACTGAAGGTATTGCAGTGGGAAGGACTTTTGCTGCTCTGAAGGGCTACAAAGTGGATGGGAACAAGGAAATGATGGCGATTGGGCTGATGAACATTGTTGGCTCCTCTACTTCCTGCTACGTCACAACAGGTGCTTTCTCTCGGTCTGCTGTGAATCACAATGCAGGAGCCAAAACTGCAGCCTCTAATATAATAATGGCGGTGACTGTCATGGTGACTCTCCTCTTCCTCATGCCTCTGTTCCAATACACACCAAACGTAGTGCTGGGCGCGATCATAGTCACAGCGGTGGTGGGCCTCATTGACCTCCCGGCTGCTTATCAAATTTGGAAGATTGATAAATTCGATTTCATTGTGCTGTTATGTGCATTCTTGGGTGTCATCTTTATCTCTGTCCAACAGGGTCTTGCCATTGCAGTAGGAATTTCCATTTTCAAGGTCCTCCTGCAAGTCACTAGGCCAAGAACAGGGATGTTAGGGAATATACCAGGGACAGATATATATCGCAATATTCATCATTACAAGGATGGTATGAAAGTTCCAGGCTTCCTCATTTTAAGCATTGACGCTTCAATCAACTTCGCAAACACCACTTACCTCAATGAAAGGATTTTGAGATGGGTAGAAGAATATGAAGCACAAGATGCAGAAGAGGAGGGGAAAAAGCACTCATCCCTCCAATTTGTGATCCTAGACCTGTCAGCTGTGAGCACCATAGACACCAGCGGAGTCTCAATCTTTAGCGACTTGAAGAAGGCACTGGAAAAGAAGGGCCTTGAGATGGCGTTGGTGAACCCGGTGGGTGAAGTGATGGAAAAACTGCAGCGGTGGGATGAAGGCCGTGACATTCTGAGACCAGATAGTGTTTACTTGACGGTCGGTGAGGCTGTAGCTTCCCTCTCGTCCGCCGTCAAGTGTCAACCATCAAACCGGGCATAG 1911 46.78 MEVHKVVPPPHRSTFQKFKTRLKETFFPDDPLRQFKGQPPKRKWILGAQYVFPILQWGPNYSLKLFKSDIVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAALGSSRDLAVGPVSIASLILGSMLRQEVSPSKDPILFLQLAFSSTFFAGVVQASLGILRLGFIIDFLSKATLIGFMAGAAIIVSLQQLKALLGITHFTKQMGLVPVLGSVFHNTAEWSWQTIVMGFCFLSLLLLARHVSMKKPNLFWVSAGAPLASVIISTLLVFAFKAQHHGISIIGKLQEGLNPPSWNMLHFHGSYLGLVMKTGLVTGIISLTEGIAVGRTFAALKGYKVDGNKEMMAIGLMNIVGSSTSCYVTTGAFSRSAVNHNAGAKTAASNIIMAVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVVGLIDLPAAYQIWKIDKFDFIVLLCAFLGVIFISVQQGLAIAVGISIFKVLLQVTRPRTGMLGNIPGTDIYRNIHHYKDGMKVPGFLILSIDASINFANTTYLNERILRWVEEYEAQDAEEEGKKHSSLQFVILDLSAVSTIDTSGVSIFSDLKKALEKKGLEMALVNPVGEVMEKLQRWDEGRDILRPDSVYLTVGEAVASLSSAVKCQPSNRA* 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4650631 4654857 - Vvi1g431 Vvi1g431 769631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g431 636 CDD STAS_SulP_like_sulfate_transporter 498 607 - -
Vvi1g431 636 Gene3D STAS domain 477 627 IPR036513 -
Vvi1g431 636 PANTHER SULFATE TRANSPORTER 2 632 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi1g431 636 SUPERFAMILY SpoIIaa-like 503 624 IPR036513 -
Vvi1g431 636 ProSitePatterns SLC26A transporters signature. 95 116 IPR018045 GO:0008271|GO:0008272
Vvi1g431 636 PANTHER BNAA09G30120D PROTEIN 2 632 IPR030313 -
Vvi1g431 636 TIGRFAM sulP: sulfate permease 53 601 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi1g431 636 Pfam Sulfate permease family 66 445 IPR011547 GO:0016021
Vvi1g431 636 Pfam STAS domain 503 620 IPR002645 -
Vvi1g431 636 ProSiteProfiles STAS domain profile. 497 624 IPR002645 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g431 K17471 - vvi:100256148 1238.4