Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g45 ATGTTCACCCTCGTCGCCGGTTCTGTACCGGCGGGTTTGGGAGCAACGGCGAAATGCGGAAGCCTCTGGCAATTCAGAGCAACTGCCGATGTGTTCCCTTCATTCATTCCGAAAGAAGTCGAGAGAATCAAAGACCCATTTGCTCGAAAGCTAGCGACAAGGATCGAGAGACTACCTGTGCAGCTTAGCTCCTCTAACAGTTGTATCATGAGCAGTTGCGTGAAGCCATTATCACCAAGCAAGACAAGTCCAGTGGTTCTCCTCCATGGTTTTGACAGCTCCTGTTTAGAATGGAGATACACATATCCGCTGCTCGAGGAGGCTGGTTTAGAGACATGGGCTGTTGACATTCTTGGTTGGGGCTTCTCTGATTTAGAAAGGCTTCCATCTTGTGACGTGGCAACTAAGCGTGATCACTTTTATCAGCTTTGGAAGTCCCACATCAAAAGGCCAATGATATTGGTTGGACCAAGCCTTGGTGCTGCAGTTGCAATTGACTTTACAGCTAACCATCCAGAAGCTGTTGATAAGCTGGTCTTAATTGATGCAAGTGTATATACAGAAGGCACGGGAAACCTAATGAAGTTACCCAGGGCGGTTGCCTATGCTGGGGTCTATATATTGAAGAGCATTCCTCTGCGCTTTTATGCAAATGTTTTGGCTTTCAAGAGTATATCATTCACTAGAAGCTCAGACTGGACAAAAGTGGGCCGCCTACATTGTCTATATCCCTGGTGGGAGGATGCAACTGTGAATTTTATGATTAGTGGGGGTTATAATGTTAGTTCTCAGATACAACAGGTAAAGAAGAAGACACTTATCATATGGGGTGAGGATGACCAGATAATCAGCAACAAGCTTGCTGTGAGGTTACATTGTGAATTGCCGAATGCAATTATAAGCCAAATACCAGATTGTGGGCACCTCCCTCATGTGGAAAAGCCTCACTCTGTTTCCAAGTTGATTATGGAATTTGTTCAAGAGGATAGCTATAAAGAGGCCCAATGCATTTCCCAGTATTGA 1023 45.36 MFTLVAGSVPAGLGATAKCGSLWQFRATADVFPSFIPKEVERIKDPFARKLATRIERLPVQLSSSNSCIMSSCVKPLSPSKTSPVVLLHGFDSSCLEWRYTYPLLEEAGLETWAVDILGWGFSDLERLPSCDVATKRDHFYQLWKSHIKRPMILVGPSLGAAVAIDFTANHPEAVDKLVLIDASVYTEGTGNLMKLPRAVAYAGVYILKSIPLRFYANVLAFKSISFTRSSDWTKVGRLHCLYPWWEDATVNFMISGGYNVSSQIQQVKKKTLIIWGEDDQIISNKLAVRLHCELPNAIISQIPDCGHLPHVEKPHSVSKLIMEFVQEDSYKEAQCISQY* 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 515729 520849 + Vvi1g45 Vvi1g45 769245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g45 340 PANTHER HYDROLASE 26 335 - -
Vvi1g45 340 SUPERFAMILY alpha/beta-Hydrolases 83 327 IPR029058 -
Vvi1g45 340 Gene3D alpha/beta hydrolase 75 331 IPR029058 -
Vvi1g45 340 Pfam Alpha/beta hydrolase family 85 318 IPR000073 -
Vvi1g45 340 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 26 335 - -
Vvi1g45 340 PRINTS Alpha/beta hydrolase fold signature 154 167 IPR000073 -
Vvi1g45 340 PRINTS Alpha/beta hydrolase fold signature 272 286 IPR000073 -
Vvi1g45 340 PRINTS Alpha/beta hydrolase fold signature 109 124 IPR000073 -
Vvi1g45 340 PRINTS Alpha/beta hydrolase fold signature 168 181 IPR000073 -
Vvi1g45 340 PRINTS Epoxide hydrolase signature 89 107 IPR000639 GO:0003824
Vvi1g45 340 PRINTS Epoxide hydrolase signature 109 124 IPR000639 GO:0003824
Vvi1g45 340 PRINTS Epoxide hydrolase signature 303 325 IPR000639 GO:0003824
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g45 Vvi14g1036 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g45 - - vvi:100254284 692.189