Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g452 ATGGGTGAACAGAAATTGAAGACCCGCGTGGTTAAAGACAATTGCAATCCTGAGTGGAACGAGGAATTGACTCTCTCTATTGCCGACACCGACGTTCCAATCAATCTAGTAGTGTATGACAGCGACACATTCACCTTAGACGACAAAATGGGGGACGCAGAGATAGACATCAAACCATATGTGGAGTGCCTGAAAATGGGCCTGGAAAACCTTCCCACTGGGACGGTTATCTCCAGAGTTCAGCCGAGCCGGACGAACTGCCTAGCTGATGAGAGCTGCTGTGTTTGGGACAATGGAAAAATCCGGCAAGACATGCTTCTCAGGCTGAGAAATGTAGAATGTGGGGAGGTAGAGGTCCAAATTGAATGGATTAATATTCCAGGCTGCAGGGGACTGTTTTGA 402 48.01 MGEQKLKTRVVKDNCNPEWNEELTLSIADTDVPINLVVYDSDTFTLDDKMGDAEIDIKPYVECLKMGLENLPTGTVISRVQPSRTNCLADESCCVWDNGKIRQDMLLRLRNVECGEVEVQIEWINIPGCRGLF* 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4866663 4868192 - Vvi1g452 Vvi1g452 769652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g452 133 Gene3D C2 domain 1 128 IPR035892 -
Vvi1g452 133 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 130 - -
Vvi1g452 133 Pfam C2 domain 2 59 IPR000008 -
Vvi1g452 133 ProSiteProfiles C2 domain profile. 1 73 IPR000008 -
Vvi1g452 133 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 130 IPR044562 -
Vvi1g452 133 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 82 IPR035892 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g452 Vvi17g194 ECH
Vvi1g452 Vvi14g752 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g452 - - vvi:100252560 280.411