Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g46 | ATGGCTGTTTTAGTGTATTTTGTGCTTTTCCTGGCCATGACTGGCCATTCAAGTGCTGCTGTCTATTGTGTGTGTAAAGATGGGTTGAGTGACCAAGCTCTTCAGAAAACCTTGGATTATGCCTGTGGAGCTGGAGCTGACTGCTCCCCAGTTCTTCAAAATGGGGCTTGTTACAACCCCAACACTGTGAAGGATCACTGTAGTTATGCTGTTAACAGCTATTTCCAGAAGAAGGGTCAAGCTTCTGGGAGCTGTGATTTTGCAGGAACTGCTACCCAAAGTCAGACTAACCCTTCCAGCGTTTCAACTTGTGTTTATCCTACAAGTGCAAGGGTCTGTGATTAA | 345 | 45.51 | MAVLVYFVLFLAMTGHSSAAVYCVCKDGLSDQALQKTLDYACGAGADCSPVLQNGACYNPNTVKDHCSYAVNSYFQKKGQASGSCDFAGTATQSQTNPSSVSTCVYPTSARVCD* | 115 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 523826 | 526024 | - | Vvi1g46 | Vvi1g46 | 769246 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g46 | 114 | SMART | X8_cls | 21 | 106 | IPR012946 | - | |
Vvi1g46 | 114 | Pfam | X8 domain | 22 | 92 | IPR012946 | - | |
Vvi1g46 | 114 | PANTHER | PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1 | 1 | 111 | - | - | |
Vvi1g46 | 114 | PANTHER | BETA-1,3 GLUCANASE | 1 | 111 | IPR044788 | - | |
Vvi1g46 | 114 | Gene3D | - | 16 | 112 | - | - |
Event-related genes

Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1g46 | - | - | vvi:100242217 | 231.491 |