Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g481 ATGGAGAATTCATCTTCTCCAGTTTCTGCGGCTGATGTAGAAGAGCCCGTTGAGCTGAAAAAGGTCGACAGGCAGATCCGGGTTTTCTTTTCTGTGCCTGAGAGCGTAGCAGCAAAAATTGAGCTGCCAGATTCTTTTTTCAACCTCTCGATTGGAGAGCTGAAAAGAGAAGCCGATGCAAGGAAGAAAAAGATTGCAGAATCTCAGCTTTTGATCCCCAAGTCATACAAGGAAAAACAGGCAAAAATTGCAAGGAGGAGGTACACAAAAACTGTTATTCGGGTCCAGTTTCCTGATGGAGTTGTGCTCCAAGGTGTCTTTTCTCCTTGGGAACCAACCAGTGCTCTCTATGAGTTTGTAAGCTCTGCACTAAAAGAACCATGTTTGGAGTTTGACCTGTTACATCCTGTGGTTATTAAACGTCGGGTGATACCGCATTTTCCTGCAGCAGGAGATAGAGCCACAACTTTAGATGAAGAGGAACTGGTCCCCTCTGCTCTTATCAAGTTCAAACCCATTGAGACAGATTCTGTTGTTTTCACTGGTCTTCGTAATGAACTGCTTGAAATCAGTGAACCACTCATAAATGATTCAGCAGTTGCTCAAGCATGA 612 44.12 MENSSSPVSAADVEEPVELKKVDRQIRVFFSVPESVAAKIELPDSFFNLSIGELKREADARKKKIAESQLLIPKSYKEKQAKIARRRYTKTVIRVQFPDGVVLQGVFSPWEPTSALYEFVSSALKEPCLEFDLLHPVVIKRRVIPHFPAAGDRATTLDEEELVPSALIKFKPIETDSVVFTGLRNELLEISEPLINDSAVAQA* 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5295142 5301096 - Vvi1g481 Vvi1g481 769681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g481 203 Gene3D - 81 173 - -
Vvi1g481 203 SUPERFAMILY Ubiquitin-like 58 170 IPR029071 -
Vvi1g481 203 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 5 195 - -
Vvi1g481 203 ProSiteProfiles UBX domain profile. 86 170 IPR001012 GO:0005515
Vvi1g481 203 Pfam UBX domain 87 137 IPR001012 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g481 K14011 - vvi:100257839 393.275