Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g486 ATGGCTTCTTCTTCATCGTCTTCTTCTGATGATTGTAGGCCCATTTCGAATGAAGGACTGGGGGGTGATCTGAGTGCTCTTCAGAAGCACGTTGCTTTCTTTGACCAGAACAAAGACGGGACCGTCTACCCATGGGAGACTTACAGAGGCTTCCGCGCAATTGGGTGTGGTATTTTCTTGTCCGCCGGCAGTGCCTTTTTGATTAATCTCGCTCTCAGTCGGAAAACTCGACCGGGAAAATTCCCTTCTCTACTCCTCCCAATTGAGATAAAAAACATCCATATGGCCAAACATGGAAGTGACTCCGGAGTCTATGATAGTGAAGGAAGGTTTGTTCCTTCAAAGTTTGAAGAGATTTTCACCAAGCATGCGGGTGCTAATTCAAACGCTTTAACATCTGATGAACTGCTGGCGATGCTCAAGTATAACAGGGTCCCAAAAGATTACAGTGGATGGCTTGCAAGCTGGACAGAATGGAAGATCTTATACTTCCTTTGCAAGGACAAGAATGGTCTACTACACAAAGAAACTATTAGAGCAGTCTACGATGGAAGCCTGTTTGAAAGGATGCAGGAGCATAGAGCTTCAGCTCGGAAGAAAGCTCCTCATTCTGTCTAA 618 45.47 MASSSSSSSDDCRPISNEGLGGDLSALQKHVAFFDQNKDGTVYPWETYRGFRAIGCGIFLSAGSAFLINLALSRKTRPGKFPSLLLPIEIKNIHMAKHGSDSGVYDSEGRFVPSKFEEIFTKHAGANSNALTSDELLAMLKYNRVPKDYSGWLASWTEWKILYFLCKDKNGLLHKETIRAVYDGSLFERMQEHRASARKKAPHSV* 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5326468 5334423 - Vvi1g486 Vvi1g486 769686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g486 205 Pfam Caleosin related protein 24 190 IPR007736 -
Vvi1g486 205 PANTHER INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED 8 200 - -
Vvi1g486 205 PANTHER PEROXYGENASE 3-RELATED 8 200 IPR007736 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g486 K17991 - vvi:100242160 414.461