Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g486 | ATGGCTTCTTCTTCATCGTCTTCTTCTGATGATTGTAGGCCCATTTCGAATGAAGGACTGGGGGGTGATCTGAGTGCTCTTCAGAAGCACGTTGCTTTCTTTGACCAGAACAAAGACGGGACCGTCTACCCATGGGAGACTTACAGAGGCTTCCGCGCAATTGGGTGTGGTATTTTCTTGTCCGCCGGCAGTGCCTTTTTGATTAATCTCGCTCTCAGTCGGAAAACTCGACCGGGAAAATTCCCTTCTCTACTCCTCCCAATTGAGATAAAAAACATCCATATGGCCAAACATGGAAGTGACTCCGGAGTCTATGATAGTGAAGGAAGGTTTGTTCCTTCAAAGTTTGAAGAGATTTTCACCAAGCATGCGGGTGCTAATTCAAACGCTTTAACATCTGATGAACTGCTGGCGATGCTCAAGTATAACAGGGTCCCAAAAGATTACAGTGGATGGCTTGCAAGCTGGACAGAATGGAAGATCTTATACTTCCTTTGCAAGGACAAGAATGGTCTACTACACAAAGAAACTATTAGAGCAGTCTACGATGGAAGCCTGTTTGAAAGGATGCAGGAGCATAGAGCTTCAGCTCGGAAGAAAGCTCCTCATTCTGTCTAA | 618 | 45.47 | MASSSSSSSDDCRPISNEGLGGDLSALQKHVAFFDQNKDGTVYPWETYRGFRAIGCGIFLSAGSAFLINLALSRKTRPGKFPSLLLPIEIKNIHMAKHGSDSGVYDSEGRFVPSKFEEIFTKHAGANSNALTSDELLAMLKYNRVPKDYSGWLASWTEWKILYFLCKDKNGLLHKETIRAVYDGSLFERMQEHRASARKKAPHSV* | 206 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 5326468 | 5334423 | - | Vvi1g486 | Vvi1g486 | 769686 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g486 | 205 | Pfam | Caleosin related protein | 24 | 190 | IPR007736 | - | |
Vvi1g486 | 205 | PANTHER | INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED | 8 | 200 | - | - | |
Vvi1g486 | 205 | PANTHER | PEROXYGENASE 3-RELATED | 8 | 200 | IPR007736 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1g486 | K17991 | - | vvi:100242160 | 414.461 |