Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g5 ATGAAGCTCAAAGCCCCCCAATCGAACCCTTTCGAGACCATTTGGTCTCGGACCAAGTTCGACATACTTGGCAAGAAGCGTAAAGGCGAACAAAAGCGTATCGGCTTGGCTCGATCTCGCGCCATCCAAAAGAGGAACGCCACACTGTTGAAGGAGTATGAACAAAGCGCCAAGTCTTCGGTTTTTCTTGATAAGAGAATTGGGGAGCAAAACGATGCGCTTGGGGAGTTCGATAAGGCGATTTTGCGGTCACAGCGTGAGCGTCAGTTGAAACTGAAGAAGAAAAGCAAATATAATTTATCTGATGGAGAAGAAGATGAATTTGAAATTGAAGGAGTTCCTTCATTTTCAGAAAGGGATGATTTTGAAGATGAAATGGTGCCCGACGATGATGATGATGATGGTGCAGAAGGAGCTGGAACTGAGAAAAAGCCAACGTTGTTGAAACAGGTTAACGCCCATGATATGCAGAATCAGTCACAAAGGGGTCTGATGGAGGGAGAGGAAAATAAACACAAAAGCAAAAAGGAAGTGATGGAGGAGATTATTTCAAAGAGCAAGTTTTACAAGGCCCAAAAAGCAAAAGATAGGGAAGAAAATGAACATTTGGTGGAAGAATTGGATAAGAACTTCACATCCTTAGTTCAGTCTGAGGCATTATTATCTTTGACTCGACCAGACAAAGTGAATGCTTTAAAGGCTCTTGTAAACAAGAGCATTCCAAATGAATATATGAAGAAAGATGATGTATCCGCTATGCAGCACATAAAATCTTTTAAGCAGGAACAACCTGATTCCTACGACAAAATTATAGGTGAGATGACATTGGATATGCGTGCTCGTCCATCAGACAGGACAAAAACGCCTGAAGAGATTGCCCAAGAGGAGAGAGAACGACTAGAGCGACTGGAGGAAGAGCGTCAGAAGAGAATGCTTGCTCCTAATGATTCCAGTGATGAAGAAGGTGATTCACGTGAAGATGCTGTTGAAGCATCTAACCAGAGGCTAAGATCTATTTCTGGGGATGATCTTGGTGATTCCTTCTCTCTTGATGTGCTGCCAGAGTCTAAGAAGGGCTGGGTTTATGAGGTTCTTGACAGAAAGGATACAAATGAGCTTGAAACGGAAGATTATGGATCTTCCGAGGAATCAGAAAGTCCTGAGAATGAGAGTGATGATGAAGGTTTTGAAAAAGATAATGATAATTGCGAAATGACTTCTTCCTTGAAGGACTGGGAACAGAGTGATGACGACAAACTTAGTACAGATTTGGAAGATAGTGGTAATGCAGAAATCAATAGAAACAATATTGATTCATTAGATGCCAAGAAAATAAAAACAAATGTTAAACATCCTTCGTCTCAACAAGATTCCATTCCTTACGTGATTAAAGCTCCAACCAGTTTGGAAGAATTGTTCATGTTGTTGGAGAATTGTTCTGATTCTGACATTGTTGAGATAATTCATCGAATTCGTATAAACAATGCAATCAGTCTTGCAGTAGAGAATCGGAAGAAAATGCAAGTATTTTATGGTGTATTATTGCAATATTTTGCTGTCTTGGCAAATAAAAAGCCATTAAATTTCAAGCTATTGAATTTGCTGGTCAAGCCATTAATGGAGATAAGTGTGGAGATCCCATACTTTGCAGCAATATGTGCTCGTCAACGGATATTACGGACTAGAATGCAATTCTGTGAGGCAATTAAAATCCCAGAGAAGAGTAGTTGGCCTTCTTTGAAAACATTATTTCTCCTGAGACTCTGGTCGATGATATTTCCATGCTCTGACTTTCGTCATGTTGTCATGACCCCAGCTACACTGTTGATGTGTGAATATCTGATGCGTTGTCCTATTTTATCTGGTTATGATATTGCCATTGGTTGTTTCTTGTGCTCCATGGTTCTCTCGGTTGTTAAACAATCTCGGAAGTTCTGTCCTGAAGCCATAATGTTTCTCCAAACTTTGTTAATGGTTGCTTTGGATGGAAACTCAAAATTATCTCAGGATTCTCAGTTTTATTTTTTCATGGAACTTAAAACGCTCAAGCCCCTGTTGGCAATACGAGGACATGTAGATGATCTTAGTCCTCTGGATTTCCTCACACTCATGGCCATGCCAGAGGGCTCTTCGTTTTTCAGCTCAGATAATTTCAGGGCTTGTGTGCTGGTATCCATCATTGAAACTCTACAAGGATTTGTTGATATTTATGGAGGATACAATTCATTTCCTGAAATTTTCTTGCCAATATCAACATTGTTACTTGCATTGGCAGAACAGGAAAACATGCCCAATGCATTGAAGGAGAAAATTAGAGGTGTTGAAGTGCTTATTAAGGAGAAAACTCATGAACACCATATGCTGCGTCAACCACTTCAAATGCGGAAACAAAAGCCAGTGCCTATCAAATTATTCAATCCAAAATTTGAGGAGAACTTTGTTAAGGGTAGAGACTATGATCCAGATCGTGAACGGGCTGAGCAGAGAAAATTGAAGAAACTTATAAAACAGGAGGCTAAGGGGGCAGCTCGTGAACTACGTAAAGATAATTATTTCTTATTTGAGGTAAAGAAAAGGGATAAGGCAATGCAGGAAGAAGAAAGAGCAGAGAAGTATGGGAAGGCAAGGGCATTTCTCCAAGAACAAGAACATGCTTTCAAATCTGGACAATTGGGAAAAGGCAGGAAGAGAAGGAGATGA 2700 40.22 MKLKAPQSNPFETIWSRTKFDILGKKRKGEQKRIGLARSRAIQKRNATLLKEYEQSAKSSVFLDKRIGEQNDALGEFDKAILRSQRERQLKLKKKSKYNLSDGEEDEFEIEGVPSFSERDDFEDEMVPDDDDDDGAEGAGTEKKPTLLKQVNAHDMQNQSQRGLMEGEENKHKSKKEVMEEIISKSKFYKAQKAKDREENEHLVEELDKNFTSLVQSEALLSLTRPDKVNALKALVNKSIPNEYMKKDDVSAMQHIKSFKQEQPDSYDKIIGEMTLDMRARPSDRTKTPEEIAQEERERLERLEEERQKRMLAPNDSSDEEGDSREDAVEASNQRLRSISGDDLGDSFSLDVLPESKKGWVYEVLDRKDTNELETEDYGSSEESESPENESDDEGFEKDNDNCEMTSSLKDWEQSDDDKLSTDLEDSGNAEINRNNIDSLDAKKIKTNVKHPSSQQDSIPYVIKAPTSLEELFMLLENCSDSDIVEIIHRIRINNAISLAVENRKKMQVFYGVLLQYFAVLANKKPLNFKLLNLLVKPLMEISVEIPYFAAICARQRILRTRMQFCEAIKIPEKSSWPSLKTLFLLRLWSMIFPCSDFRHVVMTPATLLMCEYLMRCPILSGYDIAIGCFLCSMVLSVVKQSRKFCPEAIMFLQTLLMVALDGNSKLSQDSQFYFFMELKTLKPLLAIRGHVDDLSPLDFLTLMAMPEGSSFFSSDNFRACVLVSIIETLQGFVDIYGGYNSFPEIFLPISTLLLALAEQENMPNALKEKIRGVEVLIKEKTHEHHMLRQPLQMRKQKPVPIKLFNPKFEENFVKGRDYDPDRERAEQRKLKKLIKQEAKGAARELRKDNYFLFEVKKRDKAMQEEERAEKYGKARAFLQEQEHAFKSGQLGKGRKRRR* 900
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 92039 107832 - Vvi1g5 Vvi1g5 769205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g5 899 MobiDBLite consensus disorder prediction 89 176 - -
Vvi1g5 899 MobiDBLite consensus disorder prediction 274 319 - -
Vvi1g5 899 Pfam Nop14-like family 7 884 IPR007276 GO:0032040
Vvi1g5 899 Coils Coil 862 882 - -
Vvi1g5 899 Coils Coil 290 313 - -
Vvi1g5 899 MobiDBLite consensus disorder prediction 376 399 - -
Vvi1g5 899 MobiDBLite consensus disorder prediction 122 136 - -
Vvi1g5 899 PANTHER NOP14 2 899 IPR007276 GO:0032040
Vvi1g5 899 MobiDBLite consensus disorder prediction 274 350 - -
Vvi1g5 899 MobiDBLite consensus disorder prediction 371 435 - -
Vvi1g5 899 MobiDBLite consensus disorder prediction 400 425 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g5 K14766 - vvi:100254292 1623.22