Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g50 ATGTCCGTACACTCTCCGTGCAAAGCTCCCCCTTCTTCCACTTCTTCTCTTTCCAAGGCATCTCTAAATGAGCAATCTCAAGTTGATTTGGAACTCCGAATTCTTGAAGCTCTTGAAATTTATCCTCTTGTCAAGCTACAAGGCATTCATCGTCACTTTATCCTCTATAGTCTAATGGAATTTATGCGAAGAAGCTTTGAACGGAACTTCACTTCTGAGGAGGTTTTGCAGTTGCTGGATCGTTTCTACAACTTAGAAATGCTGAAACCAGATGATGAGGACTCGGAGTTCTTAAGTCAAGAGGAAGAATTTTGCTTGCCCCAAAGTTATTTTGCCAAAGAAGAATCGTAA 351 41.03 MSVHSPCKAPPSSTSSLSKASLNEQSQVDLELRILEALEIYPLVKLQGIHRHFILYSLMEFMRRSFERNFTSEEVLQLLDRFYNLEMLKPDDEDSEFLSQEEEFCLPQSYFAKEES* 117
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 558160 562819 + Vvi1g50 Vvi1g50 769250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g50 116 PANTHER BNAA07G09500D PROTEIN 1 115 - -
Vvi1g50 116 MobiDBLite consensus disorder prediction 1 22 - -
Vvi1g50 116 PANTHER MRG-BINDING PROTEIN 1 115 IPR012423 GO:0005634|GO:0006355|GO:0043189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g50 - - vvi:100853084 221.476