Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g51 ATGGCCAAGCTCGCCGAACAGGCTGAGCGCTATGAAGAAATGGTGGAGTGTATGAAAACAGTGGCAAAACTCGACCTTGAGCTAACTGTGGAGGAGAGGAACCTCCTCTCTGTGGGGTACAAAAATGTTATAGGCGCTCGACGTGCTTCTTGGCGCATTATGTCTTCGATTGAGCAGAAAGAAGAGTCAAAGGGAAACGAGCAGAATGTTAAACTGATTAAGGGTTACCGCCAGAAGGTTGAGGAGGAGCTCTCCAAGATTTGTGGTGACATTCTGACAATCATAGACAAACACCTGATCCCCTCTTCTGGCTCGGGGGAAGCCACTGTGTTCTATTACAAGATGAAAGGTGACTACTACCGGTATCTGGCTGAGTTCAAGACTGACCAGGAAAGGAAAGAGGCCTCTGAGCAGTCACTGAAGGGCTACGAGGCATGTTCACTTCTTGCTGCCTCCAGCACTGCTAACACTGACCTCCCTTCAACCCACCCAATCCGTCTTGGCCTTGCTCTCAACTTCTCTGTCTTCTACTATGAGATAATGAATTCTCCTGAAAGGGCCTGCCATTTGGCTAAGCAAGCTTTTGATGAGGCAATTGCAGAATTGGACACCTTGAGCGAGGAGTCATACAAGGACAGCACTCTGATTATGCAGCTGTTGAGAGACAACCTCACTCTCTGGACCTCTGATTTGCCTGAAGATGGAGGTGAAGACAACTTCAAAGGTGAAGAACCCAAGGCTGCTGAACCTACTGAGCATTGA 762 48.56 MAKLAEQAERYEEMVECMKTVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEQNVKLIKGYRQKVEEELSKICGDILTIIDKHLIPSSGSGEATVFYYKMKGDYYRYLAEFKTDQERKEASEQSLKGYEACSLLAASSTANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNFKGEEPKAAEPTEH* 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 563210 566736 - Vvi1g51 Vvi1g51 769251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g51 253 ProSitePatterns 14-3-3 proteins signature 1. 33 43 IPR023409 -
Vvi1g51 253 SUPERFAMILY 14-3-3 protein 1 230 IPR036815 -
Vvi1g51 253 Coils Coil 1 21 - -
Vvi1g51 253 Pfam 14-3-3 protein 1 228 IPR023410 -
Vvi1g51 253 MobiDBLite consensus disorder prediction 234 253 - -
Vvi1g51 253 ProSitePatterns 14-3-3 proteins signature 2. 210 229 IPR023409 -
Vvi1g51 253 MobiDBLite consensus disorder prediction 231 253 - -
Vvi1g51 253 PANTHER 14-3-3 PROTEIN 1 247 IPR000308 -
Vvi1g51 253 PIRSF 14-3-3 1 240 IPR000308 -
Vvi1g51 253 Gene3D - 1 240 IPR036815 -
Vvi1g51 253 SMART 1433_4 1 241 IPR023410 -
Vvi1g51 253 Coils Coil 188 208 - -
Vvi1g51 253 PANTHER BNAC03G57490D PROTEIN 1 247 - -
Vvi1g51 253 PRINTS 14-3-3 protein zeta signature 27 56 IPR000308 -
Vvi1g51 253 PRINTS 14-3-3 protein zeta signature 76 100 IPR000308 -
Vvi1g51 253 PRINTS 14-3-3 protein zeta signature 107 129 IPR000308 -
Vvi1g51 253 PRINTS 14-3-3 protein zeta signature 174 200 IPR000308 -
Vvi1g51 253 PRINTS 14-3-3 protein zeta signature 201 230 IPR000308 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g51 - K06630 vvi:100254211 486.878