Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g583 | ATGACTCCTTATAAGAGATCTAGGATGATCTTGCGTTTTGCTGATTTGCTTGAAAAGCACAATGATGAGATTGCAGCACTCGAAACTTGGGATAATGGGAAGCCATATGAACAAGCTGCAAAGGTTGAAGTACCATTGATGATACGTTTGATGCGGTACCATGCGGGTTGGGCAGATAAGATTCATGGTCTCACAGTTGGACCTGCATTAGCATGTGGTAACAATATCGTTCTAAAGACAGCAGAGCAGACACCATTGTCTGCCTTGTATCTATCAAAGTTATTGCATGAGGCCGGGCTTCCTCCAGATGTTCTAAATGTGGTTTCTGGTTATGGTCCAACTGCTGGTGCAGCACTTGCCAGCCATTTGGATATGGGCAAGCTTGCTTTCACTGGATCAACTGTAACTGGAAATTCTGTTCTTCAATTGGCTGCAGGGAGCAATCTTAAGCCAGTGACTTTAGAGCTTGGAGGGAAATCCCCTGTCATTGTGTGTGAGGATGCTAATGTAGATGAGGCTGTTGAGCTAGCCCACTTTGCTTTATTCTTTAATCAGTGGCAATGTTGTGCTGCTTGCTCTCGTACATTTGTACATGAAAGTATATATGATGAGTTTGTAGAGAAGGCAAAGACACGTGCTTTAAGACGTACCATTGGTAATCCATTCAAGGCAGGCATTGAGCAAGGCCCCCAGATTGATTCAGATCAATTTGAGAAGATCCTGAGATACATAAGATCTGGTGTTGAAAATGCAGGTACCCTTGAAACTGGAGGTGAGAGATTTGGCAATGAGGGCTTCTTCATTAAGCCTACAGTTTTCTCAAATGTTCAGGATGGCATGTTGATAGCACAGGACGAGATATTTGGACCAGTTCAGTCCATCCTGAAATTCAAGGACCTTGATGAGGTGATAAGAAGGGCAAACGCCGCTAGTTATGGGTTGGCCGCAGGAGTCTTTACCCAGAACTTAGACACAACCAACACCCTGACCCGTGCACTAAGGGTGGGCACAGTATGGGTTAACTGCTTTGATGTGTTTGATGCAGCGATTCCTTTTGGTGGGTACACGATGAGTGGGCATGGCAGAGAAAAGGGTATGTACAGTCTTCAAAATTACCTGCAAGTGAAGGCTGTTATTGCTTCCTTGAAGAACCCTGCGTGGTTATAA | 1167 | 44.64 | MTPYKRSRMILRFADLLEKHNDEIAALETWDNGKPYEQAAKVEVPLMIRLMRYHAGWADKIHGLTVGPALACGNNIVLKTAEQTPLSALYLSKLLHEAGLPPDVLNVVSGYGPTAGAALASHLDMGKLAFTGSTVTGNSVLQLAAGSNLKPVTLELGGKSPVIVCEDANVDEAVELAHFALFFNQWQCCAACSRTFVHESIYDEFVEKAKTRALRRTIGNPFKAGIEQGPQIDSDQFEKILRYIRSGVENAGTLETGGERFGNEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDLDEVIRRANAASYGLAAGVFTQNLDTTNTLTRALRVGTVWVNCFDVFDAAIPFGGYTMSGHGREKGMYSLQNYLQVKAVIASLKNPAWL* | 389 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 6624949 | 6628677 | - | Vvi1g583 | Vvi1g583 | 769783 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g583 | 388 | PANTHER | ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE | 1 | 66 | - | - | |
Vvi1g583 | 388 | PANTHER | ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE | 66 | 388 | - | - | |
Vvi1g583 | 388 | ProSitePatterns | Aldehyde dehydrogenases glutamic acid active site. | 154 | 161 | IPR029510 | GO:0016491 | |
Vvi1g583 | 388 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 160 | 349 | IPR016163 | GO:0016620 | |
Vvi1g583 | 388 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 1 | 66 | - | - | |
Vvi1g583 | 388 | PANTHER | ALDEHYDE DEHYDROGENASE-RELATED | 66 | 388 | - | - | |
Vvi1g583 | 388 | SUPERFAMILY | ALDH-like | 1 | 381 | IPR016161 | GO:0016491 | |
Vvi1g583 | 388 | Pfam | Aldehyde dehydrogenase family | 66 | 378 | IPR015590 | GO:0016491 | |
Vvi1g583 | 388 | Pfam | Aldehyde dehydrogenase family | 1 | 64 | IPR015590 | GO:0016491 | |
Vvi1g583 | 388 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 66 | 378 | IPR016162 | GO:0016491 | |
Vvi1g583 | 388 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 1 | 65 | IPR016162 | GO:0016491 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1g583 | K00128 | - | vvi:100267386 | 689.878 |