Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g583 ATGACTCCTTATAAGAGATCTAGGATGATCTTGCGTTTTGCTGATTTGCTTGAAAAGCACAATGATGAGATTGCAGCACTCGAAACTTGGGATAATGGGAAGCCATATGAACAAGCTGCAAAGGTTGAAGTACCATTGATGATACGTTTGATGCGGTACCATGCGGGTTGGGCAGATAAGATTCATGGTCTCACAGTTGGACCTGCATTAGCATGTGGTAACAATATCGTTCTAAAGACAGCAGAGCAGACACCATTGTCTGCCTTGTATCTATCAAAGTTATTGCATGAGGCCGGGCTTCCTCCAGATGTTCTAAATGTGGTTTCTGGTTATGGTCCAACTGCTGGTGCAGCACTTGCCAGCCATTTGGATATGGGCAAGCTTGCTTTCACTGGATCAACTGTAACTGGAAATTCTGTTCTTCAATTGGCTGCAGGGAGCAATCTTAAGCCAGTGACTTTAGAGCTTGGAGGGAAATCCCCTGTCATTGTGTGTGAGGATGCTAATGTAGATGAGGCTGTTGAGCTAGCCCACTTTGCTTTATTCTTTAATCAGTGGCAATGTTGTGCTGCTTGCTCTCGTACATTTGTACATGAAAGTATATATGATGAGTTTGTAGAGAAGGCAAAGACACGTGCTTTAAGACGTACCATTGGTAATCCATTCAAGGCAGGCATTGAGCAAGGCCCCCAGATTGATTCAGATCAATTTGAGAAGATCCTGAGATACATAAGATCTGGTGTTGAAAATGCAGGTACCCTTGAAACTGGAGGTGAGAGATTTGGCAATGAGGGCTTCTTCATTAAGCCTACAGTTTTCTCAAATGTTCAGGATGGCATGTTGATAGCACAGGACGAGATATTTGGACCAGTTCAGTCCATCCTGAAATTCAAGGACCTTGATGAGGTGATAAGAAGGGCAAACGCCGCTAGTTATGGGTTGGCCGCAGGAGTCTTTACCCAGAACTTAGACACAACCAACACCCTGACCCGTGCACTAAGGGTGGGCACAGTATGGGTTAACTGCTTTGATGTGTTTGATGCAGCGATTCCTTTTGGTGGGTACACGATGAGTGGGCATGGCAGAGAAAAGGGTATGTACAGTCTTCAAAATTACCTGCAAGTGAAGGCTGTTATTGCTTCCTTGAAGAACCCTGCGTGGTTATAA 1167 44.64 MTPYKRSRMILRFADLLEKHNDEIAALETWDNGKPYEQAAKVEVPLMIRLMRYHAGWADKIHGLTVGPALACGNNIVLKTAEQTPLSALYLSKLLHEAGLPPDVLNVVSGYGPTAGAALASHLDMGKLAFTGSTVTGNSVLQLAAGSNLKPVTLELGGKSPVIVCEDANVDEAVELAHFALFFNQWQCCAACSRTFVHESIYDEFVEKAKTRALRRTIGNPFKAGIEQGPQIDSDQFEKILRYIRSGVENAGTLETGGERFGNEGFFIKPTVFSNVQDGMLIAQDEIFGPVQSILKFKDLDEVIRRANAASYGLAAGVFTQNLDTTNTLTRALRVGTVWVNCFDVFDAAIPFGGYTMSGHGREKGMYSLQNYLQVKAVIASLKNPAWL* 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6624949 6628677 - Vvi1g583 Vvi1g583 769783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g583 388 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 1 66 - -
Vvi1g583 388 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 66 388 - -
Vvi1g583 388 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 154 161 IPR029510 GO:0016491
Vvi1g583 388 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 160 349 IPR016163 GO:0016620
Vvi1g583 388 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 66 - -
Vvi1g583 388 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 66 388 - -
Vvi1g583 388 SUPERFAMILY ALDH-like 1 381 IPR016161 GO:0016491
Vvi1g583 388 Pfam Aldehyde dehydrogenase family 66 378 IPR015590 GO:0016491
Vvi1g583 388 Pfam Aldehyde dehydrogenase family 1 64 IPR015590 GO:0016491
Vvi1g583 388 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 378 IPR016162 GO:0016491
Vvi1g583 388 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 65 IPR016162 GO:0016491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g583 K00128 - vvi:100267386 689.878