Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g6 ATGATTGTGGTTGATTCTAGTGTTGAGGCTAAGGGAGCTCTACAATGGGCTCTCTCCCACACTGTTCAGAGTCAAGACACTTTGATTCTTCTCTATGTGACCAAGCCTTGTAAACAAGGTGAAGAGTGTGGCAAGGAGGTGGCTCCAAGGGTTTATGAGCTTCTTTACTCTATGAAGAATGTGTGTCAATTGAAGAGACCTGAGGTGGAAATAGAGGTTGCAGTGGTGGAAGGGAAGGAGAAAGGTCCAACCATAGTGGAAGAGGCGAAAAAACGAGGGGTGGCACTACTGGTTCTGGGGCAGAGAAAGCGGTCCATGACATGGAGGCTTGTGATGATGTGGGCTGTGAATCGAGTTGGGGGTGGGGTGGTGGAGTACTGTATCCAGAATGCTGATTGCATGGCAATTGCAGTGAGGAGGAAAAGCAAGAAGGGCGGAGGGTATTTGATCACCACCAAGCGTCACAAAGACTTCTGGCTCCTGGCCTGA 489 49.49 MIVVDSSVEAKGALQWALSHTVQSQDTLILLYVTKPCKQGEECGKEVAPRVYELLYSMKNVCQLKRPEVEIEVAVVEGKEKGPTIVEEAKKRGVALLVLGQRKRSMTWRLVMMWAVNRVGGGVVEYCIQNADCMAIAVRRKSKKGGGYLITTKRHKDFWLLA* 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 109278 110282 - Vvi1g6 Vvi1g6 769206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g6 162 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 162 - -
Vvi1g6 162 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 142 - -
Vvi1g6 162 Pfam Universal stress protein family 1 139 IPR006016 -
Vvi1g6 162 Gene3D HUPs 1 147 IPR014729 -
Vvi1g6 162 CDD USP_Like 1 138 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi1g6 Vvi17g436 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g6 - - vvi:100254361 327.02