Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g614 ATGGCACCCTATTCCCCGGATCTGTGGCTTCCCCTGGTTCTCCTATTCCTCTCACTGCTGTTTCTTCTGAAGAAAATATTAGAGTTGAAGGAGCAAAAGGGGCCTCCTGGCCCTCCTAAGCTTCCCATTATAGTCTCATCCGCAGAAGCTGCAAAAAAGGTGTTGAAAGATCATGATATTTCCTGTTGCAGTAGACCTCCCTTAATCAGCATTGGAAGACTGTCCTACAATTATCTTGACATATCTTTTGCACCATACGGCCCATATTGGAGGGAGATCCGAAAGATATGCGTTCTCCAGCTTTTCAGCACGAATAGGGTGCAGTCATTTCAGGTCATCAGAGAAGCAGAGGTTGCTTTGCTGATTGATTCCTTGGCACAATCATCTTCTTCTGCAAGCCCCGTTGACCTCACTGACAAGATCATGTCTCTCACTGCAAATATGATTTGCAGGATTGCATTTGGGAGGAGTTTTGAAGGGAGTGAATTCGGTAAAGGGAGATTTCAAGAAGTGGTTCATGAAGCCACTGCCATGATGAGCAGCTTCTTTGCGGCTGATTTCTTTCCATATGTCGGTAGGATTGTGGATAGACTCACTGGGATTCATGAAAGGTTGGAGAAGAGTTTCCATGAATTGGATTGCTTTTACCAACAGGTGATTGAGGAGCATCTCAATCCAGGAAGGATGAAAGAGGAGCATGAGGACATTATTGACGTGCTTCTCAACATAGAGAAGGAACAAGATGAATCTAGTGCATTTAAGCTCACTAAAGATCATGTTAAAGCAATCCTTATGGATTTGTTCTTGGCCGGAGTAGACACCGGTGCAATAACCGTGGTCTGGGCAATGACCGAGCTTGCTAGGAAGCCAGGAGTGAGGAAGAAAGTACAAGATGAAGTCAGAAGTCATATCCGAGAAAGAGGAAAAGTCAGGGAAAGTGATATTGAGCAGTTTCACTACCTCAAGATGGTGGTTAAAGAAACCCTGAGACTACATCCTCCTGTTCCTCTTCTACTTCCAAAAGAAACCATGTCCACTATAGAGATTAGTGGGTACCAGATTTATCCAAAAACCCAAAGGGAGATACCGGGGAGGAGGAGGAACCTGAGAGAAGATGGAGCTTTCACAGGAGGTCAAGACAGAGGGGAGGATGGGGACTTGAGGAGGCTGCTGGTAAGAGAGTTACAGAGAGGTAAGCTTGCTGGTTTCATCGGCATTGGAGGAGGACTTAAGGCGCTTGGAGTTGAACAGAGCCTCACTGGAAAAGGGTTCACTCAGAATTTACTCTTGGCCGGAGTCAACACTAGTGCATCGACGGTGGTCTGGGCAATGGCAGAGCTTGCAAGGAACCCAATAGTAATGAAGAAAGCACAAGCTGAAGTTAGAAGCGTCATAGGAAATAAAGGAAAAGTCACTGAAAGTGATCTTGATCAGCTTCTCTACTTCAAGCTGGTGGTTAAAGAAACTTTCAGATTACATCCTCCTAGCCCACTTCTACTTCCAAGAGAAACCATGTCCCATTTTCAGATGAATGGCTACCACATTCACCCAAAAACCCGATTCCTTCAACTCGATGTTTTAGCAATCGGGAAAGATCCCAACATATGGGAGAACACCCAGAAGAATTTTCCTTGGAGAGGTTTTACTGATACCCCAAAGATTGAGTGA 1668 45.14 MAPYSPDLWLPLVLLFLSLLFLLKKILELKEQKGPPGPPKLPIIVSSAEAAKKVLKDHDISCCSRPPLISIGRLSYNYLDISFAPYGPYWREIRKICVLQLFSTNRVQSFQVIREAEVALLIDSLAQSSSSASPVDLTDKIMSLTANMICRIAFGRSFEGSEFGKGRFQEVVHEATAMMSSFFAADFFPYVGRIVDRLTGIHERLEKSFHELDCFYQQVIEEHLNPGRMKEEHEDIIDVLLNIEKEQDESSAFKLTKDHVKAILMDLFLAGVDTGAITVVWAMTELARKPGVRKKVQDEVRSHIRERGKVRESDIEQFHYLKMVVKETLRLHPPVPLLLPKETMSTIEISGYQIYPKTQREIPGRRRNLREDGAFTGGQDRGEDGDLRRLLVRELQRGKLAGFIGIGGGLKALGVEQSLTGKGFTQNLLLAGVNTSASTVVWAMAELARNPIVMKKAQAEVRSVIGNKGKVTESDLDQLLYFKLVVKETFRLHPPSPLLLPRETMSHFQMNGYHIHPKTRFLQLDVLAIGKDPNIWENTQKNFPWRGFTDTPKIE* 556
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6994566 7007375 - Vvi1g614 Vvi1g614 769814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g614 555 PRINTS E-class P450 group I signature 50 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 PRINTS E-class P450 group I signature 144 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 PRINTS E-class P450 group I signature 259 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 PRINTS E-class P450 group I signature 279 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 PRINTS E-class P450 group I signature 483 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 PRINTS E-class P450 group I signature 525 549 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 SUPERFAMILY Cytochrome P450 35 358 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 Pfam Cytochrome P450 43 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 Pfam Cytochrome P450 426 540 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 Gene3D Cytochrome P450 23 363 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 PANTHER CYTOCHROME P450 71B11-RELATED 422 550 - -
Vvi1g614 555 PANTHER CYTOCHROME P450 71B11-RELATED 43 359 - -
Vvi1g614 555 PANTHER CYTOCHROME P450 71B11-RELATED 3 44 - -
Vvi1g614 555 Gene3D Cytochrome P450 416 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g614 555 PANTHER CYTOCHROME P450 71B16-RELATED 3 44 - -
Vvi1g614 555 PANTHER CYTOCHROME P450 71B16-RELATED 422 550 - -
Vvi1g614 555 PANTHER CYTOCHROME P450 71B16-RELATED 43 359 - -
Vvi1g614 555 SUPERFAMILY Cytochrome P450 423 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g614 - - vvi:104877321 621.698