Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g616 ATGGCGCTCTATTCTCCATCAATCTGGCTTCATCTGCTTCTGCTACTTCTCCCTCTTATGTTTCTCATAAAACGGAAAATAGAGTTGAAGGGGCAAAAGAAGCCGCTGCCTCCTGGCCCTACTAAGCTTCCCATTATAGTCTCCTCTGCGGAAGCTGCAAGGGAATTCTTGAAAACTCATGATATTGATTGTTGCAGTCGACCTCCCTTAGTTGGACTTGGAAAATTCTCATACAATCACCGAGACATATCTTTTGCGCCATACGGCGACTACTGGAGGGAGGTACGCAAGATCTGCGTTCTCGAGGTGTTTAGCACAAAAAGGGTGCAGTCGTTTCAGTTCATCAGAGAAGAGGAGGTCGCTTTGCTGATTGATTCAATTGTGCAATCGTCTTCTTCTGGAAGTCCTATTGATCTTACCGAGAGGCTAATGTCTCTCACAGCAAATATAATTTGTAGGATTGCATTCGGAAAGAGTTTTCAAGCGAGTGAGTTTGGTGACGGAAGATTTCAAGAAGTGGTTCATGAAGCCATGGCTTTGTTGGGCGGGCTCACTGCATCCGATTTCTTTCCGTACGTGGGTCGGATTGTGGATAGACTCACTGGTCTTCATGGAAGGCTTGAGAGGAGTTTCCATGAAATGGACGGCTTCTACCAACAGGTGATCGAAGACCATCTCAACCCAGGAAGGGTGAAAGAGGAGCATGAAGACATCATCGACGTGCTGCTGAGAATAGAGAGGGAACAATCTGAATCCAGTGCCCTACAGTTTACTAAAGATAACGCGAAAGCAATCCTTATGGATTTATTCTTGGCTGGAGTGGACACTGGTGCAATCACCGTAGCTTGGGCAATGACCGAGCTTGCTAGGAACCCAGGAATAATGAAAAAAGCCCAGGCTGAAGTTAGAAGCTCCATTGGAAATAAAGGAAAAGTCACGGAGAGTGATGTTGATCAGCTTCACTACCTCAAGGTGGTGGTCAAAGAAACTTTGAGACTGCATCCTCCCGCCCCACTTCTACTTCCAAGAGAAACCATGTCACATTTTGAGATAAACGGGTACCACATTTACCCCAAAACCCAAGTCCACGTAAACGTTTGGGCAATTGGGCGAGACCCCAACCTCTGGAAGAACCCAGAGGAGTTTTTGCCCGAGAGGTTTATGGACAACTCTTGGAGCTCGCACTTGCTAATCTTTTATATCGTTTCAATTGGAACTTGCCGAATGGGATTAGGGAGGCAGATATTAGCATGGAAGAAGCAGCAGGTCTTACTGTCCGTAAGAAGTTTGCTCTTAACCTTGTGCCAATTCTCCATCACTGTTAACAAGAAAAGAAAAGTAGAAAAATAA 1350 45.63 MALYSPSIWLHLLLLLLPLMFLIKRKIELKGQKKPLPPGPTKLPIIVSSAEAAREFLKTHDIDCCSRPPLVGLGKFSYNHRDISFAPYGDYWREVRKICVLEVFSTKRVQSFQFIREEEVALLIDSIVQSSSSGSPIDLTERLMSLTANIICRIAFGKSFQASEFGDGRFQEVVHEAMALLGGLTASDFFPYVGRIVDRLTGLHGRLERSFHEMDGFYQQVIEDHLNPGRVKEEHEDIIDVLLRIEREQSESSALQFTKDNAKAILMDLFLAGVDTGAITVAWAMTELARNPGIMKKAQAEVRSSIGNKGKVTESDVDQLHYLKVVVKETLRLHPPAPLLLPRETMSHFEINGYHIYPKTQVHVNVWAIGRDPNLWKNPEEFLPERFMDNSWSSHLLIFYIVSIGTCRMGLGRQILAWKKQQVLLSVRSLLLTLCQFSITVNKKRKVEK* 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7027703 7030273 - Vvi1g616 Vvi1g616 769816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g616 449 PRINTS E-class P450 group I signature 52 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g616 449 PRINTS E-class P450 group I signature 146 164 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g616 449 PRINTS E-class P450 group I signature 261 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g616 449 PRINTS E-class P450 group I signature 281 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g616 449 PRINTS E-class P450 group I signature 324 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g616 449 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g616 449 PANTHER CYTOCHROME P450 71B16-RELATED 45 393 - -
Vvi1g616 449 PANTHER CYTOCHROME P450 71B16-RELATED 3 46 - -
Vvi1g616 449 SUPERFAMILY Cytochrome P450 37 394 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g616 449 PANTHER CYTOCHROME P450 71B11-RELATED 3 46 - -
Vvi1g616 449 PANTHER CYTOCHROME P450 71B11-RELATED 45 393 - -
Vvi1g616 449 Gene3D Cytochrome P450 29 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g616 449 PRINTS P450 superfamily signature 272 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g616 449 PRINTS P450 superfamily signature 325 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi1g616 449 Pfam Cytochrome P450 45 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g616 - - vvi:100256069 724.161