Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g62 ATGGTGTTCAAGGGCACGGAAAAGAGGCCGGCTAGGGTTTTGGTGGAGGAAATTGGGAGCATGGGCGGGCACTTGAGTGCCTGCACATCGAGGGAGCACACGGCATACTGCGCTGAGGTCATGGACGAAAATGTTCCCAAGGCGCTGGATCTTCTTTCCGATATGTTGCAGCATTCGTGTTTCCGTGAGGATCAGATGGAGCGCGAGCGCGATCTGATTCTTCAACAAATTAAAGAGGTACAGGGGCCCAGTAAGGATATTATCTTTGACCATTTGCATGCAACTGCATTCCAGTACACACCTTTGGGTAGAACTGTTCTGGGATCTGCGAAAAATATCAAGACTATCCACAAATCTCATATTAAAGACTATATTTCAGCTCACTGTGCTGCCCACAGAATGGTAATTTCTGCTGCTGGAGCTGTTAAGCATGAGGATATTGTTGAGCAAGTGAAGAAGACATTTACAAAGCTATCAGCTAATCCTTCCGTGACTAGTCAGTTGGTTGCAGAGAAGCCAGCTGTTTTCACTGGATCTGAGGTTCGGATAATTGACGATGATCTTCCTCTAGCACAATTTGCAGTTGCATTCAAAGGAGCTTCATGGACAGATCCAGATTCCATCGCTTTGATGGTCATCAAGTTGATGCTGGGCTCTTGGAACAAAAATGCAGGAGGGGGAAAGCACATGGGTTCACAGCTTGTACAGAGGGTTGCCATTAATGAAATAGCTGAATGCATGATGGCTTTTAACACTAACTATAAAGACACAGGCTTGTTTGGTGTTTATGCTGTAGCCAAGCCAGATTGCTTGGATGATTTAGCTTATGCAATAATGCTTGAGATAAGTAAGTTACCTTATCGAGTCTCAGAGGAGGATGTTATTCGTGCTCGTAATCAGCTGAAATCTTCTCTGCTTCTTCATATTAATGGACTCAGCCATGTTGTTGAAGACATTGGTCGTCAGCTACTTACTTATGGCCGAAGAATTCCATTGGCTGAATTATTTGCAAGGATTGACGCGGTGGATGCCAACACTGTCAAACGCATTGCAAACCGTTTTATATTTGATAGGGATATTGCAATTGCTGCCCTGGGACCCATCCAGGGTTTACCCGACTACAACTGGTTCAGGCGCAGGACCTACTTGCTGCGTTACTAA 1161 45.22 MVFKGTEKRPARVLVEEIGSMGGHLSACTSREHTAYCAEVMDENVPKALDLLSDMLQHSCFREDQMERERDLILQQIKEVQGPSKDIIFDHLHATAFQYTPLGRTVLGSAKNIKTIHKSHIKDYISAHCAAHRMVISAAGAVKHEDIVEQVKKTFTKLSANPSVTSQLVAEKPAVFTGSEVRIIDDDLPLAQFAVAFKGASWTDPDSIALMVIKLMLGSWNKNAGGGKHMGSQLVQRVAINEIAECMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMLEISKLPYRVSEEDVIRARNQLKSSLLLHINGLSHVVEDIGRQLLTYGRRIPLAELFARIDAVDANTVKRIANRFIFDRDIAIAALGPIQGLPDYNWFRRRTYLLRY* 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 656269 666920 + Vvi1g62 Vvi1g62 769262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g62 386 Pfam Insulinase (Peptidase family M16) 1 108 IPR011765 -
Vvi1g62 386 SUPERFAMILY LuxS/MPP-like metallohydrolase 1 155 IPR011249 GO:0046872
Vvi1g62 386 Pfam Peptidase M16 inactive domain 119 301 IPR007863 -
Vvi1g62 386 PANTHER METALLOPROTEASE 1 386 - -
Vvi1g62 386 Gene3D - 1 157 - -
Vvi1g62 386 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT BETA 1 386 - -
Vvi1g62 386 Gene3D - 168 386 - -
Vvi1g62 386 SUPERFAMILY LuxS/MPP-like metallohydrolase 180 376 IPR011249 GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g62 K17732 - vvi:100252667 763.837