Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi1g621 | ATGTTACGTGAAGAAGATAAAGACCGCCTCTCCGGTGGAACGGGGACTCGGAGAGCTTATTTACGGTCAGTTTCTTGGACTGATCGCTCTCCAACGAAACCTCTCCCTAGACCACAGCCAAACAGTAAGGTGAGGTCGTGTCTGCCACCACTTCAGCCTCTTTCAATTTCCCGGCGCAACGCAGAGGAGTGGCCTAGGGCGGGGTCCGATGATCTGGGTGTGTGGCCGCATCCTCCAACCCCTGGGGGGAGATTGGGGTCCATTAAACCCCTTGAGAATTCAAATTCAGAACAACCCCAGAGAGAATTTCAGTTCAAGAGGGATAAGCTTGCCTTCTTTGATAAGGAATGCTCCAGAATTGCAGATCATATATATTTGGGAAGTGATGCTGTTGCTAAGAACCGTGAAACTCTAAGGCAGAATGGTATCACCCATGTCTTGAACTGTGTTGGGTTTGTTTGCCCCGAGTATTTCAAGAGTGATCTTGTTTACAAGACGCTTTGGTTGCAAGATAGCCCATCTGAGGACATCACGAGTATTCTTTATGATGTGTTTGATTACTTTGAGGATGTTAGAGAGCAAGGTGGGCGGGTTCTTGTTCATTGTTGTCAGGGAGTGTCAAGATCGAGCTCTCTGGTCATTGCATATCTCATGTGGAGGGAGGGCCAGAGCTTTGAAGGTGCATTTCAGTATGTGAAAGCAGCCCGAGGAGTGACTAACCCGAATATGGGTTTTGCTTGTCAACTCCTGCAGTGCCAGAAGAGGGTGCATGCTGTACCAGTGAGCCCAAATTCTGTGCTTAGGATGTATCGGATGGCTCCCCACTCTCCATATGATCCTCTTCATCTTGTACCAAAAATGTTAAGCCATCCAGGTACACTAGGACTTGACTCTCGTGGGGCATTTATTGTTCATGTCCCTTCAGCGATATATGTCTGGATTGGGAAGAATTGCAACATGGTGATGTCAAATAATGCAAGAGCAGCTGCCTATCAGATGGTAGCAACAAAGAAAGTTGATGAATACAATCTTGATTTTGAAATTTTCCATAAGGCTCTTGCTGGTGGGGTTGTTCCACCTTTTCCATTATCAGGAACTGGATCTGAGACTTGTCTCCCTGCTAGGGAAAATGGATGGGGTCGACTAAGGCGGAAGTTTACTAGTGGCTTTATGAAGGAATTTGTCACAAAACTGAATTGTGACACCATTCAATCCAGTCATGGAGCAGATATGATTATAGATACTTGTAATGAAGTGAAACAACCCGTTTCCATTTCTAATCCTTTGTCACCATCAACACCTCCATGCGGTTCACCAGATTCACTTCCTTGTTCCCCAAATGGCAGCTCAATTAGCAGTATTGGTAAAGACATGGAACACCCTGTTCCTCTTACTGATCCTTTGTTGTCAGAAACACCTAACTGTGGTTCACCAGATTCTTTCTCTCGTTTTCTGGGTGGTAGCCCTAAGTTCAGTTCCAAATCTCCTTCACTCTCACCTTCGACCTCTGAGTATTCCAGTTCATTTACCTTTTCGCCCTCATCTTCTAATTGGTCCGATTTGTCATACCTTTCTTCTCAACAACCTTCACCTTCCAGCCTCGAGCCCACAGATCCATTCTGTGTGAAGAATGGAACCTGCCCCTCCATTGCTGAGCGCAGAGGGAGTAATCCTCCACCTAGGATGTTACTACCCTCAGTTGATGAACCACCTCAAGTGCCTCCGAACCTGGTAAGGTCTTGGTCCTTTTCCTTACCTGATTTGGATGATGTTATGATGAAGGATGTCGATTGTGACCAGTTCGAGCATGAAGGCAATGGAGAAGAGCTAATGTTAGATGGTGAACATTTTGGTACTGGAAATGAGTTAGAAAGTGAGATTGAAGATAAGAAAGTGTATGGTAACTTTTATGTTCCTTTGGGTGATACATCTGATAGGGTTGCAGAAGAAACAAATCTAGCTCTTTACCAGTGGCCTACCATGAATAAAGTGGAGTTGTATAACTTTGGTGTCCTTGATTCTAGATCAGTATATATTATGTTTGCTCCGGATTCAAACTTGGGCACAAGTAATCCTGAGGTTTTATATGTATGGCTAGGAAGGGGTGTTTCATATGAAAAAGGCCAGAGTCAATTGACTAGCAGTGATGGCACATGCAAGGATAATCATGTCCACTGGGAGATGGTTGGGCACAAATTCCTTGCACAAATGGGTTTGCGGAGTGAAGCCCTCATTCAGATAGTCAGGGAAGGCGAGGAGCCGATGCAGCTCCTGAACCATCTAAACTCTTTCTCATTTCACAAGACAGAAAACAGCAGTCACAGACTTACAGCTGAGAAAAATTAG | 2346 | 45.1 | MLREEDKDRLSGGTGTRRAYLRSVSWTDRSPTKPLPRPQPNSKVRSCLPPLQPLSISRRNAEEWPRAGSDDLGVWPHPPTPGGRLGSIKPLENSNSEQPQREFQFKRDKLAFFDKECSRIADHIYLGSDAVAKNRETLRQNGITHVLNCVGFVCPEYFKSDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSSSLVIAYLMWREGQSFEGAFQYVKAARGVTNPNMGFACQLLQCQKRVHAVPVSPNSVLRMYRMAPHSPYDPLHLVPKMLSHPGTLGLDSRGAFIVHVPSAIYVWIGKNCNMVMSNNARAAAYQMVATKKVDEYNLDFEIFHKALAGGVVPPFPLSGTGSETCLPARENGWGRLRRKFTSGFMKEFVTKLNCDTIQSSHGADMIIDTCNEVKQPVSISNPLSPSTPPCGSPDSLPCSPNGSSISSIGKDMEHPVPLTDPLLSETPNCGSPDSFSRFLGGSPKFSSKSPSLSPSTSEYSSSFTFSPSSSNWSDLSYLSSQQPSPSSLEPTDPFCVKNGTCPSIAERRGSNPPPRMLLPSVDEPPQVPPNLVRSWSFSLPDLDDVMMKDVDCDQFEHEGNGEELMLDGEHFGTGNELESEIEDKKVYGNFYVPLGDTSDRVAEETNLALYQWPTMNKVELYNFGVLDSRSVYIMFAPDSNLGTSNPEVLYVWLGRGVSYEKGQSQLTSSDGTCKDNHVHWEMVGHKFLAQMGLRSEALIQIVREGEEPMQLLNHLNSFSFHKTENSSHRLTAEKN* | 782 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7094754 | 7100348 | + | Vvi1g621 | Vvi1g621 | 769821 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi1g621 | 781 | MobiDBLite | consensus disorder prediction | 424 | 473 | - | - | |
Vvi1g621 | 781 | CDD | DSP | 117 | 251 | - | - | |
Vvi1g621 | 781 | MobiDBLite | consensus disorder prediction | 520 | 540 | - | - | |
Vvi1g621 | 781 | Pfam | Dual specificity phosphatase, catalytic domain | 124 | 254 | IPR000340 | GO:0008138|GO:0016311 | |
Vvi1g621 | 781 | Gene3D | Protein tyrosine phosphatase superfamily | 89 | 258 | IPR029021 | - | |
Vvi1g621 | 781 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 200 | 210 | IPR016130 | GO:0016311|GO:0016791 | |
Vvi1g621 | 781 | Gene3D | Severin | 268 | 356 | IPR029006 | - | |
Vvi1g621 | 781 | SMART | dsp_5 | 116 | 255 | IPR020422 | GO:0006470|GO:0008138 | |
Vvi1g621 | 781 | PANTHER | MKPA PROTEIN | 10 | 762 | - | - | |
Vvi1g621 | 781 | SUPERFAMILY | Actin depolymerizing proteins | 651 | 774 | - | - | |
Vvi1g621 | 781 | MobiDBLite | consensus disorder prediction | 1 | 100 | - | - | |
Vvi1g621 | 781 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 175 | 236 | IPR000387 | GO:0016311|GO:0016791 | |
Vvi1g621 | 781 | SUPERFAMILY | Actin depolymerizing proteins | 262 | 335 | - | - | |
Vvi1g621 | 781 | MobiDBLite | consensus disorder prediction | 520 | 539 | - | - | |
Vvi1g621 | 781 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 108 | 257 | IPR029021 | - | |
Vvi1g621 | 781 | MobiDBLite | consensus disorder prediction | 18 | 32 | - | - | |
Vvi1g621 | 781 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 116 | 258 | IPR020422 | GO:0006470|GO:0008138 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi1g621 | - | - | vvi:100254928 | 1037.71 |