Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g628 ATGTCGAAAGCTTGGGGAGGGGCCGGTGCCTGGGCGGCCGATGCTGAGAGGGCCGAAGCCGAAGAGCGTGAGCAAGCCGAAGAGCGTCAGCAAGCGGCGGCGGCCGCTGCGGCCGGTTCTCAGGGCTTCCCTAGCCTGAAAGAAGCCGTCGCCAAGCCCAAGAAGAAAAAGATCAGTCTCATGGAGTTCACGATGGGCGTTTACACCGATTCGGGAGGCGACGCGCGCCGGGATTCGCCGATGGAGGCTTCGGATTTTGATCAACCTTCTAGGGCCGATGAAGTTGATAACTGGGCAATGGCAAAGAAACCTCTTCCTTCGCATTCGTCACTTCCTGCTAGAACTTCCAACATCGGTCCGGGGTTTCGCGACTCTGGCCCAGAGCCAGATCGGTGGAGTAGGGGAGGATTGCGAGAGGGTGATCGTGAGCGCCCCCGATTGGTTTTGGATCCACCAAAGGGAGAAGTGGTGGGCAGCGAACCAGCAAGGTCGAATAGGCCCAATCCTTTTGGAGCAGCTCGACCTAGGGAAGAAATTTTGGCTGAAAAAGGATTGGATTGGAAGAAGTTGGATTCAGAAATTGAGGCTAAGAAGACAAGTAGGCCAACTAGCTCGCACTCCAGTAGACCTTCGAGTGCACAGTCTAGCCGGTCTGAGGGTCCAATCATACAGAGTTTGGATGGAGCAGCAAAGCCTCGGCCAAAAGTGAACCCTTTTGGAGATGCCAAGCCTAGGGAGGTTTTGCTTGAAGAGCGAGGTAAGGATTGGCGGAAGATTGATAGGGAATTGGAGCATCGAGGTGTTGACAGGCCTCAGACAGAGGAAGAAAAGCTTTTAAAAGAAGAGATAGAGCAGCTAAAGAAAGAATTACAGAATGAGTTGGGTAACAGTGAAGCTGCACTAGCGTCTGGAGGGGCCCAGACCAGTTTACGTGATGAAATTGCTAGCAAAGAAAAAGACTTAGAACAGCTGATCCGCGATTTGGATGACAAAGTTCGTTTTGGTCAGAAAGCCATTGAAAGGCCTGGGTCTGCAGCAGGCAGAGTAGCTGTCTTTCCTGAGAGACCACCCTCTCAGTCTGGATCAGTTGAGGAGTTCAGAAATACAGAGTTCATGGAGAGGCCTCGATCACGTGGTACAGGAGATTTGTGGACAAGACCTGTTGATGACAGAAGAGCTTTCCAAGGTGGTAGAGATAGAGGATTTCTTGGTAACAGAGATCTGGGCAGGTCTAGATCGCGGGAAAGATGGTGA 1254 52.31 MSKAWGGAGAWAADAERAEAEEREQAEERQQAAAAAAAGSQGFPSLKEAVAKPKKKKISLMEFTMGVYTDSGGDARRDSPMEASDFDQPSRADEVDNWAMAKKPLPSHSSLPARTSNIGPGFRDSGPEPDRWSRGGLREGDRERPRLVLDPPKGEVVGSEPARSNRPNPFGAARPREEILAEKGLDWKKLDSEIEAKKTSRPTSSHSSRPSSAQSSRSEGPIIQSLDGAAKPRPKVNPFGDAKPREVLLEERGKDWRKIDRELEHRGVDRPQTEEEKLLKEEIEQLKKELQNELGNSEAALASGGAQTSLRDEIASKEKDLEQLIRDLDDKVRFGQKAIERPGSAAGRVAVFPERPPSQSGSVEEFRNTEFMERPRSRGTGDLWTRPVDDRRAFQGGRDRGFLGNRDLGRSRSRERW* 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7217133 7229969 + Vvi1g628 Vvi1g628 769828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g628 417 MobiDBLite consensus disorder prediction 75 98 - -
Vvi1g628 417 MobiDBLite consensus disorder prediction 127 150 - -
Vvi1g628 417 MobiDBLite consensus disorder prediction 176 202 - -
Vvi1g628 417 Pfam Plant specific eukaryotic initiation factor 4B 109 401 IPR010433 GO:0003743
Vvi1g628 417 Pfam Plant specific eukaryotic initiation factor 4B 74 108 IPR010433 GO:0003743
Vvi1g628 417 Pfam Plant specific eukaryotic initiation factor 4B 1 74 IPR010433 GO:0003743
Vvi1g628 417 MobiDBLite consensus disorder prediction 203 222 - -
Vvi1g628 417 MobiDBLite consensus disorder prediction 1 55 - -
Vvi1g628 417 MobiDBLite consensus disorder prediction 351 417 - -
Vvi1g628 417 MobiDBLite consensus disorder prediction 367 417 - -
Vvi1g628 417 Coils Coil 307 331 - -
Vvi1g628 417 MobiDBLite consensus disorder prediction 68 275 - -
Vvi1g628 417 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 110 417 IPR010433 GO:0003743
Vvi1g628 417 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 74 IPR010433 GO:0003743
Vvi1g628 417 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 74 109 IPR010433 GO:0003743
Vvi1g628 417 Coils Coil 12 38 - -
Vvi1g628 417 MobiDBLite consensus disorder prediction 15 29 - -
Vvi1g628 417 MobiDBLite consensus disorder prediction 238 275 - -
Vvi1g628 417 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 110 417 - -
Vvi1g628 417 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 74 109 - -
Vvi1g628 417 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 74 - -
Vvi1g628 417 Coils Coil 273 303 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g628 - - vvi:100242447 585.874