Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g647 ATGAGGGGCAGGCTGTGGACCTTATGGGTGGTGCAGACCTTGGGAGGTGTACTCTGCATTATCCTGGGACGAGTAGGATCTTTGAATGCATCCATCATTGTGATGATTGCATTCTCATTGTTCGTCCAAGCTGCATGTGGTCTTACATTTGGAGTGGTTCCTTTCATCTCCCGAAGGTCACTGGGGGTAGTATCTGGTATGACAGGAGGAGGTGGAAATGTAGGTGCAGTTCTGACTCAACTAATTTTCTTCAAAGGATCCAGATATTCAAAAGAAACAGGGATAACTCTCATGGGCATCATGATGTTATGCTGCACCCTTCCAATATGTCTAATATACTTCCCACAATGGGGTGGCATGTTTTGCGGCCCATCATCTAAAGAGAATGCCACAGAGGAAGACTATTACTCATCTGAATGGAATTCAAAAGAGAAGGAGAAAGGTTTCCATCATGGAAGTCTGAAATTTGCTGATAACAGCAGAGGTGAAAGAGGTAGAAGGGTGGGCTCTGCAGCCACACCTGATAGGACCTCATCCATGCATGTCTGA 549 45.72 MRGRLWTLWVVQTLGGVLCIILGRVGSLNASIIVMIAFSLFVQAACGLTFGVVPFISRRSLGVVSGMTGGGGNVGAVLTQLIFFKGSRYSKETGITLMGIMMLCCTLPICLIYFPQWGGMFCGPSSKENATEEDYYSSEWNSKEKEKGFHHGSLKFADNSRGERGRRVGSAATPDRTSSMHV* 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7423320 7426109 + Vvi1g647 Vvi1g647 769847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g647 182 MobiDBLite consensus disorder prediction 153 170 - -
Vvi1g647 182 MobiDBLite consensus disorder prediction 153 182 - -
Vvi1g647 182 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3-LIKE 1 174 - -
Vvi1g647 182 SUPERFAMILY MFS general substrate transporter 3 113 IPR036259 -
Vvi1g647 182 Gene3D MFS general substrate transporter like domains 1 118 IPR036259 -
Vvi1g647 182 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 174 IPR044772 GO:0015112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g647 K02575 - vvi:100260250 360.147